Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02045 ATGGCTGCGATCGCGGGAGCGCACGTGTTTGGTGTTGTGAGTTTTCAGCTCAAGCAAGCTGAAATTCCCTTTGCATGTTCCAGCTTAATCCGCAAGCATATTGGAGATTCTCCTCAGCGCAATGTGGCTCTAAGACGCAGAGCAAATGGAACAATTCTTCCCCAAATCAGAGCCCAGAACGTTCTTCCAGACTATGTTCCAAAATCGGAGTTTTATAAAGTAGAAGCCATTCTCAGGCCCTGGCGAGTCCCTCAGGTTTCTTCGGCTATGTTGAAAATGGGAATTCGCGGTGTCACTGTATCTGATGTCAAGGGCTTTGGTTCTCAGGGTGGTTCAAAAGAGAGACAGGGAGGCTCTGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAAATGGAAATAGTAGTGAGAAAGGACCAGGTTGAGGCAGTAATTGACAAAATTATCGAGGAGGCAAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTTGATCCCCGTCTCAGATGTTATAAGAATTCGAACAGGTGAGCGTGGGGAGCAGGCAGAGAGGATGACTGGGGGCCGAAGTGATATGCTATCTGCTGTATGA 591 0.467 MAAIAGAHVFGVVSFQLKQAEIPFACSSLIRKHIGDSPQRNVALRRRANGTILPQIRAQNVLPDYVPKSEFYKVEAILRPWRVPQVSSAMLKMGIRGVTVSDVKGFGSQGGSKERQGGSEFSEDNFVAKVKMEIVVRKDQVEAVIDKIIEEARTGEIGDGKIFLIPVSDVIRIRTGERGEQAERMTGGRSDMLSAV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02045 196 PRINTS P-II protein signature 72 87 IPR002187 GO:0006808|GO:0030234
Gma03g02045 196 PRINTS P-II protein signature 93 111 IPR002187 GO:0006808|GO:0030234
Gma03g02045 196 PRINTS P-II protein signature 123 146 IPR002187 GO:0006808|GO:0030234
Gma03g02045 196 PRINTS P-II protein signature 154 174 IPR002187 GO:0006808|GO:0030234
Gma03g02045 196 PANTHER NITROGEN REGULATORY PROTEIN P-II 37 192 IPR002187 GO:0006808|GO:0030234
Gma03g02045 196 SUPERFAMILY GlnB-like 72 182 IPR011322 -
Gma03g02045 196 ProSitePatterns P-II protein C-terminal region signature. 154 167 IPR017918 GO:0006808|GO:0030234
Gma03g02045 196 PANTHER NITROGEN REGULATORY PROTEIN P-II HOMOLOG 37 192 - -
Gma03g02045 196 SMART P_II_3 74 176 IPR002187 GO:0006808|GO:0030234
Gma03g02045 196 Gene3D - 60 192 IPR015867 -
Gma03g02045 196 ProSiteProfiles P-II protein family profile. 71 183 IPR002187 GO:0006808|GO:0030234
Gma03g02045 196 Pfam Nitrogen regulatory protein P-II 72 179 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02045 Gma-Chr3 46029586 46033407 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02045 - - gmx:100499915 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02045 03 46029586 46033407 Gma03g02045 03 46029586 46033407 ECH
Gma19g02084 19 49721815 49725597 Gma03g02045 03 46029586 46033407 GST