Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02011 ATGGATGCTCTGTGTTTACACAGTAGCATTTGTGGGATAGCTCCGTCTCCGTCCATTCTCATTACTGCAACTGCACGCGCCAATGATTACGCGTCACACTCTCGGGTGAAAGCGGTGGGGAGCTCCTCCTTGTTTTCCATATTCTCTTTTAGATACCCTTTGAAGTCCTTTTGGCCACGACCAACGGGGAATGCCACCGGCTACAACGACGCCGTTTTGGCAGAGAATGCAACGGCCGAGACAGAACAACCAGAAGGCGAAGGAGAGGGACAAAATGGGAACTGGGTTTTTAAGATTTTTCATATAAGGTCTGTTTGGAGAGGGGAACAGAGGAGCGATGATAACGATGAAGAGGAAGCTGTAACCAATGGTCAAACGGATGAAGAGGAAGAAGAGTGTGATGATTGTAGGGTTGATTATGATGATGACGAAGAAGAAGAAGAAAATGAAGAGGTTTCGTTCGATAGAGACTCGTTTTCAAGAATGCTTCGGAGGGTGTCATTGTCCGAAGCTAGATTCTATGCGCGCATATCCCACTTGGGCAATTTGGCATACTGTATTCCCAAAATCAAACCAGGGAAACTCTTCAAACACTATGGTCTGCGTTTTGTAACTTCATCCATAGAGAAAAAGGAATTAGCTATGGCAGCTGAAAAAAATCAGATATCTCAAAAAGAAGAAACTAATGAGAAGGATGTGGATGAAACAAAAGAGGAAAAGAATAATGGTGGATACATGATAAGTGCATCTGCTGTATACGAGATTGCTGCTTCTGCTGCCTCTTATCTTCATGCTCAGACAAGGAGCATACTTTCATTAACATCTTCTGATGCTGCGGAAGGTGAAGGCTCAATTGAAGCAATCAATGAAAGCTTTAACGGCGATAAGATTAGAAACACGGAGGAGGCAAATTTGAAGGCAACTACGGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGCAAGTAAAGCAGGCTTTTGCAGATGATTTGAACTCAACAAGCTCTTCACCTTGTGAATGGTTCGTATGTGATGATGACCAGACCTCTACAAGATATTTTGTGATCCAGGGCTCCGAGTCGTTTGCATCCTGGCAAGCAAATCTACTATTTGAGCCAGTTCAATTTGAGGGGTTAGACGTCCATGTACATAGAGGTATATACGAGGCTGCAAAAGGGACATATCAACAGATGTTGCCAGAAATTCGTGCTCACCTAAAATCTCATGGTTCACGTGCAACTTTCCGTTTCACTGGTCATTCCCTTGGGGGGAGCTTGGCATTACTTGTAAATCTTATGCTACCGATAAGGAAGGAAGCGCTATTCTCCTCTCTGCTTCCTGTCATAACCTTTGGGGCACCATCCATCATGTGTGGAGGTGACACTCTACTTGACATGCTTGGATTGCCACGGAGCCATGTTCAGGCAATCACATTGCACAGAGATATAGTACCACGAGCATTTTCTTGCCAGTACCCTAACCATCTTGTAGAACTACTAAAGGCTGTTAATGGTAACTTCCGCAATCATCCTTGCCTTAATAACCAGAAGCTATTATATGCACCGATGGGAGAACTGCTGATCCTCCAGCCAGATGAGAATTTTTCACCAAGTCATCATCTCCTGCCCTCAGGCAGTGGACTATATATTTTGAGTGGTTCTTTATCAGAATCTAGTGACACATTAAAACAAATTTACAAAGCTCAAATGGTTTTCTTGAACACACCACACCCACTTGAGATATTAAGTGATCGATCTGCCTATGGATTTGGAGGAACCATTCAGAGAGATCATGACATGAATTCCTACTTAAAATGTGTGAGAACCGTGATTCGCCAAGAACTTAACCAGATTCGCAAGGCAAGGAGAGAGCAAAGGCAAAAGGTGTGGTGGCCTCTCGTACTGCCACGTGGAAGTGACACTAACATAGTTGGGGGGTCCATGATTCAAGACCAGCCTTCCTTCTCTGGCATCATTCAGATAGGTAGAGAGTCATTGAAAAGGGGAAAATCGGAAACGAAGTCTCGCAAAACGCAGCCTACAACGCAAGTTCGCAACCCTAACGCGAAGCTCCTCGTCGCTCCCAAGGCCTCCGCCGTCTCCGTCGCGCCAGAGTCCAGACATAGCGTCGTGAACAGTTCAATGTTCTATCTCAGTAAAATCGAACACAAATTGCCCCTGCCTCCTTCTCGTTTTGTTCTTCCTATTCGAGAAGCTATACACATGGAGCTTGAGAAACTTTTCTTAGATAAGGTTATAGCAAACTTGGGCCTCTGCATTTCTGTCTATGATATCAGATCCATTGATGGTGGGTTTATCTTCCCTGGTGATGGGGCTCCAACCTATACGGTTGTGTTCAATTTGATTATGTTTCGTCCGTTTGAGAAGGAGATCATTACTGCAAGGCTTCTTTCATCTGATGCTGATGGCTTACGATTAACCATTGGATTCTTTGATGATATTTATATTCCTGCAAGTCGTTTGCCCGACCCAAACCACTTTGTTGAGACTGAACAGAAAAAAAGGGTATTCTCTGGCCAAGAGTCAACGACTAATTCCTCGAGCAAGAAAGGTGTATGGTATTGGGATTATAACGAACAAGAATATCCTATTCAAGATACTGATGTGATCAAATTCCGAGTTACAAACGTGAGTTATCCCCAAATTCCGGTTGAGCAACCAAAAGAATCAAAGCCATTTGCCCCTATGTTGATCTCTGGAGCGATGGATGATGATGGTCTAGGTCCTGTTTCTTGGTGGTTTGCAGATGAGGATGAGGATGAGTAA 2784 0.4411 MDALCLHSSICGIAPSPSILITATARANDYASHSRVKAVGSSSLFSIFSFRYPLKSFWPRPTGNATGYNDAVLAENATAETEQPEGEGEGQNGNWVFKIFHIRSVWRGEQRSDDNDEEEAVTNGQTDEEEEECDDCRVDYDDDEEEEENEEVSFDRDSFSRMLRRVSLSEARFYARISHLGNLAYCIPKIKPGKLFKHYGLRFVTSSIEKKELAMAAEKNQISQKEETNEKDVDETKEEKNNGGYMISASAVYEIAASAASYLHAQTRSILSLTSSDAAEGEGSIEAINESFNGDKIRNTEEANLKATTDSVTAVVAANEQVKQAFADDLNSTSSSPCEWFVCDDDQTSTRYFVIQGSESFASWQANLLFEPVQFEGLDVHVHRGIYEAAKGTYQQMLPEIRAHLKSHGSRATFRFTGHSLGGSLALLVNLMLPIRKEALFSSLLPVITFGAPSIMCGGDTLLDMLGLPRSHVQAITLHRDIVPRAFSCQYPNHLVELLKAVNGNFRNHPCLNNQKLLYAPMGELLILQPDENFSPSHHLLPSGSGLYILSGSLSESSDTLKQIYKAQMVFLNTPHPLEILSDRSAYGFGGTIQRDHDMNSYLKCVRTVIRQELNQIRKARREQRQKVWWPLVLPRGSDTNIVGGSMIQDQPSFSGIIQIGRESLKRGKSETKSRKTQPTTQVRNPNAKLLVAPKASAVSVAPESRHSVVNSSMFYLSKIEHKLPLPPSRFVLPIREAIHMELEKLFLDKVIANLGLCISVYDIRSIDGGFIFPGDGAPTYTVVFNLIMFRPFEKEIITARLLSSDADGLRLTIGFFDDIYIPASRLPDPNHFVETEQKKRVFSGQESTTNSSSKKGVWYWDYNEQEYPIQDTDVIKFRVTNVSYPQIPVEQPKESKPFAPMLISGAMDDDGLGPVSWWFADEDEDE 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02011 927 Coils Coil 208 239 - -
Gma03g02011 927 SUPERFAMILY alpha/beta-Hydrolases 335 528 IPR029058 -
Gma03g02011 927 Gene3D alpha/beta hydrolase 294 521 IPR029058 -
Gma03g02011 927 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 34 693 - -
Gma03g02011 927 Pfam RNA polymerase III subunit Rpc25 796 919 IPR013238 -
Gma03g02011 927 CDD Lipase_3 307 485 - -
Gma03g02011 927 Pfam SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 721 777 IPR005576 GO:0006351
Gma03g02011 927 MobiDBLite consensus disorder prediction 119 135 - -
Gma03g02011 927 SUPERFAMILY N-terminal, heterodimerisation domain of RBP7 (RpoE) 714 791 IPR036898 -
Gma03g02011 927 Gene3D - 714 792 IPR036898 -
Gma03g02011 927 MobiDBLite consensus disorder prediction 223 239 - -
Gma03g02011 927 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 34 693 IPR043367 GO:0008970
Gma03g02011 927 Coils Coil 603 623 - -
Gma03g02011 927 Pfam Lipase (class 3) 353 490 IPR002921 GO:0006629
Gma03g02011 927 MobiDBLite consensus disorder prediction 109 135 - -
Gma03g02011 927 Gene3D - 793 919 IPR012340 -
Gma03g02011 927 MobiDBLite consensus disorder prediction 219 239 - -
Gma03g02011 927 CDD RNAP_III_Rpc25_N 715 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02011 Gma-Chr3 45707929 45719274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02011 1 667 Acyl Lipid Metabolism Gene Families AT1G02660 53.531 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02011 - - gmx:100788786 1227.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02011 03 45707929 45719274 Gma03g02011 03 45707929 45719274 ECH
Gma19g02045 19 49367460 49374832 Gma03g02011 03 45707929 45719274 GST
Gma03g02011 03 45707929 45719274 Gma10g00137 10 1307348 1310881 PCT
Gma03g02011 03 45707929 45719274 Gma02g00132 02 1278306 1281529 PCT
Gma10g00137 10 1307348 1310881 Gma03g02011 03 45707929 45719274 PCT
Gma02g00132 02 1278306 1281529 Gma03g02011 03 45707929 45719274 PCT