Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02003 ATGTTGCGGATAACGAGATTCTCGGGGTTTTTCTCCGCCGCAATGTTCGTGACTGTTCTTGTTATTCTCTCCCCCTCCTTCCAATCCGAAGCCATTCGATCCTCCCACCGATTTTCCTTCCGGAAAGCCCCTCCTTTCCGCAATGCCGCCGAATGCGCTTCTGTTTCCGGCCAAACCACCACCGTCTGCGACCCTTCCTTGGTCCACGTGGCCATAACCCTCGACGTCGACTACCTCCGCGGCTCAATCGCCGCCGTGCACTCCATCCTCCACAACTCCCTCTGTCCGGAGAACATCTTCTTCCATTTCCTCGTCTCCGACACCAACCTCCAAACCCTAGTTGAGTCCACGTTCCCAAACCTGAAATTCAACGTCTATTTCTTCGATCCGAACATCGTCGCTCACTTGATCTCCTCCTCCGTGCGGCAGGCGCTGGAGCAGCCTCTCAATTACGCGAGAAATTACCTCGTTGACCTTCTGGAGAGTTGCGTGGAGAGGGTGATTTACTTGGACTCCGATCTGGTGGTAGTGGATGACGTGGCGAAACTGTGGAGCGCGAGTCTGGACTCGCGTGCCATCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTATTTCACGGCGGGGTTCTGGTCTGAGTCGAGGTTGTCGGGGACGTTCGCGCAGCGGAGGGCGTGCTACTTCAACACGGGGGTGATGGTGATGGATCTGGTGAAGTGGAGGAAGGAAGGATACACGAAGAGAATTGAGCGTTGGATGGAGATTCAGAAGAGTGATAGGATCTATGAGCTTGGTTCTCTGCCGCCGTTTTTGCTGGTGTTCGCGGGACACGTGGCACCTATTGAGCACCGGTGGAACCAGCACGGTTTGGGCGGGGATAACGTGAAGGGTAGTTGCCGTGACTTGCACCCTGGTCCGGAAAGTTATGAAGCATCCAGTATAGCCGGCAGTGCTGCTAAATGA 966 0.5569 MLRITRFSGFFSAAMFVTVLVILSPSFQSEAIRSSHRFSFRKAPPFRNAAECASVSGQTTTVCDPSLVHVAITLDVDYLRGSIAAVHSILHNSLCPENIFFHFLVSDTNLQTLVESTFPNLKFNVYFFDPNIVAHLISSSVRQALEQPLNYARNYLVDLLESCVERVIYLDSDLVVVDDVAKLWSASLDSRAIGAPEYCHANFTKYFTAGFWSESRLSGTFAQRRACYFNTGVMVMDLVKWRKEGYTKRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVKGSCRDLHPGPESYEASSIAGSAAK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02003 321 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 69 313 IPR029044 -
Gma03g02003 321 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 6 311 - -
Gma03g02003 321 SUPERFAMILY Nucleotide-diphospho-sugar transferases 68 304 IPR029044 -
Gma03g02003 321 Pfam Glycosyl transferase family 8 69 293 IPR002495 GO:0016757
Gma03g02003 321 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 6-RELATED 6 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02003 Gma-Chr3 45657484 45658915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02003 1 309 Glycosyltransferase AT3G62660 71.037 4.35e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02003 - - gmx:100798124 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02003 03 45657484 45658915 Gma03g02003 03 45657484 45658915 ECH
Gma19g02036 19 49302752 49304733 Gma03g02003 03 45657484 45658915 GST
Gma03g02003 03 45657484 45658915 Gma10g00153 10 1419911 1421489 PCT
Gma03g02003 03 45657484 45658915 Gma02g00147 02 1391454 1393120 PCT
Gma10g00153 10 1419911 1421489 Gma03g02003 03 45657484 45658915 PCT
Gma02g00147 02 1391454 1393120 Gma03g02003 03 45657484 45658915 PCT