Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02002 ATGGTGAATACGGCGTCGTCCCCTTCTTCCTCTCCGGTGACCATTACGGTGTCGTCCGGAGGACGACGCCGCAGCATGGGTCTAACCAGTCCTGTTCCACGCGCCTCCGTCTCCGCCAACAACCCCGCTTCCCCTCTCAGGGTTTCCGGCGGCCGCGGCGGCGGCGCGTCTAAAGACGGCGGCATCGAAGAAACCAACACCGAATACGTGTCGTACACAGTCCACATCCCTCCGACGCCGGACCGCAGGCCGCTGACAGCCTCGGAGGACGGTGGAAAGAACAGCACGAGCTTCATCTCCGGCACGATCTTCACAGGAGGGTACAACTCCGTGACGCGCGGCCACGTCATGGAGTGCTCGATGGACAGCGATGCGCAGGCGAAAACGACATCGTTGACGGTTTGCGGAATGATGGGCTGTGACGAGGAAGCGATGAAAGGAAGGCTGTGTGGTGGTGGACCGTGCGAGTGCGGGTTCAAGATCTGCAGAGAGTGTTACTCGGAGTGTGGAGGGAAGTGCCCTGGCTGCAAAGCGCCTTATAAGTATGTGAGCGATGATGATGAGGAAGAAGAAGACGACGTTGAGGGGTCTGAGGGTGAGGATCAGCCTCTGCCTTTGCCTTCGATGGCTGAGTTTAAGTTGGATAAGAGGCTTTCTGTTGTGAAATCGTTCAAGACGCAGAACCATCCTCCTGATTTTGACCACACGAGGTGGCTATTTGAGACCAAGGGGACCTATGGCTATGGAAACGCTGTGTGGCCTAAAGATGGGTGTGGTGCTAATGGGTTTGAACCCCCTCCGGAGTTTGGAGAGAAGGCGAGGAGACCCTTGACTAGGAAGGTTGGAGTTTCAGCTGCTATTATCAGTCCTTATAGGTTGCTTATTCTGCTGCGTCTTGTTGCCTTGGGTTTATTTCTTACGTGGAGGGTTAGACACCCCAACCATGAAGCGATTTGGCTGTGGGCTATGTCCATAACTTGCGAGCTATGGTTTGCATTTTCTTGGATTCTTGATCAGCTTCCTAAGCTCTGTCCAGTGAACAGAGTCACTGATCTCTCTGTTCTGAAAGAGCGGTTTGAGTCTCCGAACCTGCGAAACCCGAAAGGGAGGTCTGATCTACCAGGAATTGACGTGTTTGTTTCCACAGCAGACCCTGAAAAGGAACCTCCTCTTGTAACCGCCAACACCATTCTCTCGATCCTTGCAGTTGATTATCCAGTGGAGAAGGTTGCGTGTTACTTGTCTGATGATGGTGGAGCTCTGTTGACATTTGAAGCTCTTGCTGAGACTGCTAGCTTTGCTAGAATTTGGGTTCCTTTCTGTCGGAAGCATCACATAGAGCCGCGAAATCCTGAAACGTATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTCCGGTTGGACTTTGTGAGAGAGAGGAGAAGGGTGAAGAGGGAATATGATGAGTTCAAAGTGAGGATAAACTCATTGCCTGAATCCATAAGGAGAAGGTCTGATGCTTACAATGCTCACGAGGAGTTGCGAGCTAAGAAGAAACAGATGGAAGCAGGTTCCAATGTCTCTGAACCTATTAAGGTTCCTAAAGCTACATGGATGTCCGATGGTTCTCATTGGCCAGGAACTTGGGCATCGGGTGATCAAGACCACTCAAGAGGGGACCATGCTGGTATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCAGAATTTGGTGCAGAAGCTGATGGGGATAACTTGATTGACACAACAGATGTTGATATTAGGCTTCCCATGCTTGTTTATGTGTCTCGTGAGAAGAGGCCAGGATATGATCACAACAAGAAAGCAGGAGCAATGAATGCTCTTGTTCGGACCAGTGCCATCATGTCCAATGGACCATTCATTCTGAATCTTGACTGTGATCACTACATCTACAACTCCTTGGCTATGAGAGAAGGTATGTGCTTTATGCTTGACAGGGGTGGTGATAGGATATGCTACGTTCAGTTCCCTCAAAGATTTGAGGGCATCGACCCCAGTGACAGATATGCAAACCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGCTTACAAGGCCCCATGTACGTGGGAACGGGTTGCATATTCCGAAGAACAGCTCTTTATGGATTTAGTCCTCCAAGAGCCACAGAACACCATGGCTGGTTAGGCAGGAGGAAAATCAAGTTGTTTTTGAGAAAGCCAAAGGTGTCAAAAAAGGAAGAGGATGAAATTTGTGTGCCAATAAATGGTGGTTACAATGACGATGATGCAGACATAGAGTCCTTGCTTCTTCCCAGAAGGTTCGGGAACTCTACTTCTCTTGCTGCATCCATTCCTGTGGCGGAATACCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACAAGGAAGGCCAGCAGGTTCTCTTGCCGTGCCTCGCGAGCCATTGGATGCAGCCACTGTTGCTGAGGCAATAAGTGTGATATCTTGTTTCTACGAGGATAAAACTGAATGGGGCAAACGAGTGGGGTGGATATATGGTTCAGTTACAGAAGATGTGGTCACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTACTGTGTGACCCAAAGGGATGCTTTCAGAGGAACAGCTCCAATCAACTTGACAGATAGGCTCCACCAAGTGCTTCGATGGGCAACAGGTTCTGTTGAGATTTTCTTGTCAAGGAACAATGCATTGTTGGCAAGTCCTAGAATGAAGTTCCTGCAGAGGGTGGCATATTTCAACGTGGGAATGTACCCTTTCACTTCAATCTTTCTGATTGTCTATTGCTTTCTACCAGCAGTGTCCCTATTTTCGGGGCAGTTTATAGTCCAGTCCCTTAGTGCAACCTTTCTAGTCTTCTTGCTTGGCATCACAATCACACTGTGCTTGCTTGCACTCCTCGAGATCAAGTGGTCAGGAATCACTCTACATGATTGGTGGCGAAATGAGCAGTTCTGGTTGATTGGTGGAACAAGTGCACACCCTGCTGCTGTTTTACAAGGGTTGTTGAAGGTCATAGCAGGAGTGGACATATCATTCACTTTGACCTCAAAGTCAGCCACCCCAGAAGATGGAGATGATGAGTTTGCTGATCTTTATGAGGTGAAGTGGAGCTTTCTAATGGTCCCTCCAATCACTATTATGATGGTGAATTCCATTGCTATTGCTGTGGGGGTAGCCAGGACTTTGTACAGTCCATTTCCACAATGGAGCAGACTAGTAGGAGGGGTGTTTTTCAGCTTCTGGGTTTTGTGCCATCTTTACCCCTTTGCAAAGGGCCTCATGGGAAGGAGAGGGAAGGTTCCTACCATCATCTATGTTTGGTCTGGATTGCTCTCCATTATTATCTCTTTGCTTTGGGTGTACATAAACCCTCCTTCAGGAAGAACACAAGATTACATGAATTTCCAATTCCCTTGA 3456 0.4876 MVNTASSPSSSPVTITVSSGGRRRSMGLTSPVPRASVSANNPASPLRVSGGRGGGASKDGGIEETNTEYVSYTVHIPPTPDRRPLTASEDGGKNSTSFISGTIFTGGYNSVTRGHVMECSMDSDAQAKTTSLTVCGMMGCDEEAMKGRLCGGGPCECGFKICRECYSECGGKCPGCKAPYKYVSDDDEEEEDDVEGSEGEDQPLPLPSMAEFKLDKRLSVVKSFKTQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGCGANGFEPPPEFGEKARRPLTRKVGVSAAIISPYRLLILLRLVALGLFLTWRVRHPNHEAIWLWAMSITCELWFAFSWILDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHHIEPRNPETYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEAGSNVSEPIKVPKATWMSDGSHWPGTWASGDQDHSRGDHAGIIQAMLAPPNAEPEFGAEADGDNLIDTTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLAMREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWLGRRKIKLFLRKPKVSKKEEDEICVPINGGYNDDDADIESLLLPRRFGNSTSLAASIPVAEYQGRLLQDLQGKGTQGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTQRDAFRGTAPINLTDRLHQVLRWATGSVEIFLSRNNALLASPRMKFLQRVAYFNVGMYPFTSIFLIVYCFLPAVSLFSGQFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWSFLMVPPITIMMVNSIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSGLLSIIISLLWVYINPPSGRTQDYMNFQFP 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02002 1151 MobiDBLite consensus disorder prediction 1 94 - -
Gma03g02002 1151 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 583 725 IPR029044 -
Gma03g02002 1151 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 54 1148 - -
Gma03g02002 1151 Pfam Cellulose synthase 376 1143 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma03g02002 1151 MobiDBLite consensus disorder prediction 187 206 - -
Gma03g02002 1151 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 54 1148 - -
Gma03g02002 1151 SUPERFAMILY Nucleotide-diphospho-sugar transferases 391 944 IPR029044 -
Gma03g02002 1151 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02002 Gma-Chr3 45650254 45654563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02002 47 1151 Glycosyltransferase AT3G03050 66.815 0.0 1526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02002 K00770 - gmx:100797597 2305.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02002 03 45650254 45654563 Gma03g02002 03 45650254 45654563 ECH
Gma19g02035 19 49291557 49295531 Gma03g02002 03 45650254 45654563 GST