Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01990 ATGTCTACGCAACCAAAGCTTGGTCGGATTTCCAGTATCAGAGACCGAGTTGAAGACACTCTCTCTGCTCACCGTAACGAACTCATTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTGCAACCCCATAATTTGATTGATGAACTTGACAACATCCCTGGTGATGATGAAGCAATAGTGGATCTTAAAAACGGTCCCTTTGGTGAAATTGTCAAGTCTGCAAAGgaagccatagttttgcctccttttgtggcaatagcagttcgtccaagacctggtgtttgggaatatgtccgtgttaatgtctctgatctcagcgtggagcaattaagcatttccgaatatctcagcttcaaggaagaacttgtagatggaaagattaatgagaattttgtattggagcttgattttgagccatttaatgccacgtttcctcgtccaacccgctcagcatccattggcaatggtgtccaatttcttaatcgccacctttcatcaattatgtttcgcaacaaggattccttgcagcccttgcttgatttcctccgagctcacaaatacaagggccatGctctgatgataaatgatagagtacaaaccatttccaatcttcagtctgcattggccaagactgaggattatctttctaagcttgctagtgatacactctattcagagtttgaatatgtattacaaggaatgggttttgagagaggttggggtgatactgctgaacgggtattggaaatgatgcatctgctactggatattcttcaggctcctgatccttctacactagagacttttcttgggagagtgccaatggtattcaatgttgttatattatctcctcatggctactttggacaagccaatgtcttgggtttgcctgacactggtgggcaggttgtttatatactagatcaagtgcgtgcccttgaaaatgagatgctccttcggatcaagaaacaaggacttgatttcactcccagaattctaattGttaccaggttaatacctgatgcaaaggggacaacatgcaaccagcggctagaaagagtcagtggtactgaccatactcatattttgcgagttccattcagatcagagtcaggaactctccgtaaatggatctcaaggtttgatgtgtggccttatctagagacttatgcagagGAtgttgcaagtgaaattgctgctgagttacaagggtatcctgatttcatcattggaaactacagtgatgggaatcttgttgcatctttattggcttataaaatgggagttacccagtgcacaatcgcgcatgcacttgagaagacaaaatatccagattcagatttatattggaagaaatttgaggataaataccacttttcatgccaatttactgctgacctaatagccatgaataatgctgattttataatcaccagtacataccaggagattgcaggaacGaaaaatactgttggccagtatgagagtcacactggttttactcttcctgggctctatagggttgtccatggcattgatgtttttgatcccaagttcaatattgtctctcctggagctgatatgtcaatatatttcccctactctgaaaagcagaacaggcttacagccctgcatggttcaattgaaaagctgttatttgatcctgagcagactgatgaatacattggttcattgaaagacaagtcaaagcccataattttctccatggcaaggctagacagagtgaaaaacataactggattggtagaatgctttggtaagaacagcaaattgagggaactggtcaaccttgtcgtagtagctggttatattgatgtaaagaagtcgagtgacagagaagaaattgcagaaattgagaagatgcacgagctcatgaaaaagtataatttaaatggtgattttcgttggattgctgcccaaacaaatagggcacgtaacggggagctgtatcgctacatagcagacacacAAGGTGCTTTCATTCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCCATGACTTGTGGACTCCCCACTTTTGCTACTTGTCATGGTGGTCCTGCTGAGATCATTGAGCATGGTATATCAGGATTCCACATTGATCCTTATCATCCTGATCAAGCTTCAGAGCTATTGGTTGAATTTTTCCAAAAGAGCAAGGAGGACCCAGACCATTGGAAGAAAATATCTAATGGTGGTCTTCAAAGAATTTATGAAAGGTACACTTGGAAGATTTATTCTGAAAGGCTTATGACCTTGGCGGGAGTTTATAGTTTCTGGAAATACGTTTCCAAATTAGAGAGGCGTGAAACTCGACGATATCTTGAGATGTTCTATATCCTCAAGTTCCGTGATTTGGCAAATTCTGTTCCGCTTGCAAAGGATGATGCAAGTTAA 2439 0.1189 MSTQPKLGRISSIRDRVEDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNIPGDDEAIVDLKNGPFGEIVKSAKEAIVLPPFVAIAVRPRPGVWEYVRVNVSDLSVEQLSISEYLSFKEELVDGKINENFVLELDFEPFNATFPRPTRSASIGNGVQFLNRHLSSIMFRNKDSLQPLLDFLRAHKYKGHALMINDRVQTISNLQSALAKTEDYLSKLASDTLYSEFEYVLQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTDHTHILRVPFRSESGTLRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDLYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQNRLTALHGSIEKLLFDPEQTDEYIGSLKDKSKPIIFSMARLDRVKNITGLVECFGKNSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHELMKKYNLNGDFRWIAAQTNRARNGELYRYIADTQGAFIQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGISGFHIDPYHPDQASELLVEFFQKSKEDPDHWKKISNGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLAKDDAS 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01990 812 PANTHER SUCROSE SYNTHASE 1 812 - -
Gma03g01990 812 Gene3D Glycogen Phosphorylase B; 530 757 - -
Gma03g01990 812 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Gma03g01990 812 Pfam Glycosyl transferases group 1 568 742 IPR001296 GO:0016757
Gma03g01990 812 PANTHER - 1 812 IPR012820 GO:0005985|GO:0016157
Gma03g01990 812 CDD GT4_sucrose_synthase 281 766 - -
Gma03g01990 812 Gene3D - 11 148 - -
Gma03g01990 812 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Gma03g01990 812 TIGRFAM sucr_synth: sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Gma03g01990 812 Gene3D Glycogen Phosphorylase B; 283 800 - -
Gma03g01990 812 Gene3D - 149 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01990 Gma-Chr3 45548928 45554538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01990 3 810 Glycosyltransferase AT4G02280 82.054 0.0 1423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01990 K00695 - gmx:100793371 1631.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01990 03 45548928 45554538 Gma03g01990 03 45548928 45554538 ECH
Gma19g02022 19 49181237 49187933 Gma03g01990 03 45548928 45554538 GST