Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01980 ATGCTCTCATCCAAACCTCCGCGCCGGAAAGTTGTTCCGGCGAACGGCGATGACTCCGCCGACAAACTCGACCAGCTCCTCCTCTCCTCTGCCATCTCCAACAACGAGGACCTAGGCCCGTTCATCCGCAAGGCCTTCACCTCCGGCAAGCCGGAAACGCTCCACCACCACCTCCGCCACTTCGCGCGGTCGAAGGAGTCAGAGATCGAAGAGGTGTGCAAGGCTCACTACCAGGACTTCATCCTCGCCGTCGACGACCTCCGATCCCTCCTCTCCGACGTCGATTCACTCAAGTCCTCCCTCTCCGACTCCAACTCGCGCCTCCAGCACGTCGCGCGCCCTCTCCTCTCCTCGCTCGATGCCTTCGTCGAGACGCGCAACGTCTCCAAGAACGTCAACCTCGCCATCGACTCCGTCCGCACGTGCGTCAAGCTCATGGAGGTCTGCACACGCGCCAACCGCCACCTTGCCGACGACAACTTCTACATGGCGCTCAAGTGCGTCGACGCGATCGAGCGCGAGTACTTGGACCAAACGGCGTCGTCCACGCTGAGGCGGATGCTGGAAAAGAAGATTCCGGAGATTCGGTCCTACATCGAGAGGAAGGTGAACAAGGAGTTCGGTGACTGGTTGGTGGAGATCCGTGTCGTGAGTCGCAATTTAGGTCAATTGGCGATAGGTCAAGCCTCGGCGGCGAGGCAGAGAGAAGAAGACCTAAGAATTAAGCAGCGCCAAGCGGAGGAACAGAGTAGGCTCAGCGTGAGGGACTGTATTTATGCATTGGAGGAAGAGGATGAAGACGGAATCATCGCCGGCGGGATCGGAGAAGACGGCGGTGGAGCCGCCGGGTTTGATTTGACTTCTCTGTGTAGAGCGTATCATATTCACCAGACTTTAGGGTTAGAGGATCGGTTTAAGCAGTATTATTTTGAGAACAGGAAGCTTCAGTTGACTTCGGATTTTCAGGTTTCGTCGATGACTCCTTTTCTGGAGTCTCATCAAACGTTCTTTGCGCAGATTGCAGGGTTCTTCGTGGTGGAGGATCGTGTTTTGAGGGCCGGGGGTGGGTTGATTTCGAAAATGGAAGTTGAGAACCTTTGGGATATTGCTGTTAGTAAAATGTGTTCTGTGTTGGAGGATCAGTTCTCTAGAATGCAAACTGCCAATCATTTATTGCTTATTAAGGATTATGTGAGTCTGTTAGGAGTGACGCTGCGGAGATATGGGTATCCCATTGATGCGTTGCTTGATGTTTTGAGCAAACATAGGGATAAGTACCATGAGTTGCTTTTGTCTGACTGTAGGAAGCTGATTGCGGAGGCAGTTGCGGCTGATAAATTTGAGCAGATGTTGATGAAGAAGGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATACAGACTTCGGATATCATACCTGCTTTTCCCTATGTGGCGCCATTTTCGTCCACTGTGCCAGATTGTTGTAGGATTGTGCGGTCCTTCATTGAGGATTCTGTGAGTTTCATGTCATATGGAGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAGTATTTAGACAGGCTTTTGAGTGAGGTTTTGGATGAAGCTTTAGTGAAGCTTATCAATACATCAATTAATGGGGTTTCCCAGGCAATGCAGATGGCAGCGAATATGGCTGTCTTGGAGCGTGCTTGTGATTTCTTCTTTCGCCATGCTGCACAGCTTTCAGGTGTTCCCTTGAGAATGGTGGAGAGAAGCAGAAGGAACTTCCCTCTAAGAAAAGCTCGTGATGCTGCTGAAGAGATGCTCTCTGGGCTACTCAAAGCCAAAGTTGATGGATTTATGACATTGATCGAGAATGTAAATTGGATGGGTGACGAGGCACCTCAGAGTGGAAATGAATATGTAAACGAGGTCATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCTTCTCAAGTCCTTAAGAGAGTATTACAGGAAGTTTTTGCTCACATATCGGAGAAGATAGTTGGGACTTTAGTTAGTGATTCTGTTAAGAGGTTTAATGTAAATGCTATTACTGGAATTGAAGTTGACATCCGGCTCTTAGAATCATTTGCTGATAATCAGGCCTCCCTTTTCTCTGATGGGGATGTTGATGTTCTGAGAGCATCACTTGCCGGCTCAAAGCAACTGATTAATTTGCTGTTAAGCAATCATCCAGAGAACTTCTTGAATCcagtgatcagggagaggagttacaatactttggaccacaagaaagtggtGATTGTTTCAGAAAAGTTGAGGGATCCTTCCGATCGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCGAGGCAGAATCCCAAAAGGAAATCATTGGATACATTGATAAAAAGACTTAGGGATGTTAGCTGA 2397 0.4768 MLSSKPPRRKVVPANGDDSADKLDQLLLSSAISNNEDLGPFIRKAFTSGKPETLHHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLSDSNSRLQHVARPLLSSLDAFVETRNVSKNVNLAIDSVRTCVKLMEVCTRANRHLADDNFYMALKCVDAIEREYLDQTASSTLRRMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASAARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIIAGGIGEDGGGAAGFDLTSLCRAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRAGGGLISKMEVENLWDIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKLIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTSDIIPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLSEVLDEALVKLINTSINGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRNFPLRKARDAAEEMLSGLLKAKVDGFMTLIENVNWMGDEAPQSGNEYVNEVIIYLEILVSTAQQILPSQVLKRVLQEVFAHISEKIVGTLVSDSVKRFNVNAITGIEVDIRLLESFADNQASLFSDGDVDVLRASLAGSKQLINLLLSNHPENFLNPVIRERSYNTLDHKKVVIVSEKLRDPSDRLFGTFGSRGARQNPKRKSLDTLIKRLRDVS 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01980 798 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 590 737 IPR042044 -
Gma03g01980 798 Pfam Exocyst complex subunit Sec15-like 458 762 IPR046361 -
Gma03g01980 798 Gene3D - 412 583 IPR042045 -
Gma03g01980 798 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 798 - -
Gma03g01980 798 PANTHER SEC15 7 798 IPR007225 GO:0006886|GO:0090522
Gma03g01980 798 PIRSF Sec15 4 798 IPR007225 GO:0006886|GO:0090522
Gma03g01980 798 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01980 Gma-Chr3 45490616 45493379 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01980 K19985 - gmx:100784539 1487.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01980 03 45490616 45493379 Gma03g01980 03 45490616 45493379 ECH