Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01977 ATGACCGAAAAGAAGCGGAAGGAGAGGGACGAAGGTAACCGCCGAAGACTGAAGCCGAAGAAGAAGTCAAACACTCAATGGAAGAAGACTGGCCCTCGTTTGCCCTCATCTCTGCAAAAACATATTGACCGTTTAAACCCTACCACTTCCTTCGACAGCGCCGATTCCGATGACGACAATGACGTTTACGAGTACGAGGAAGAACGGGCCGAAGAGGAGTCCAAGAAAAACAAGCGTTACGACTCTGCTTCCGTCGACGATGACCTTGCTCAAGAAATTGAGGATGAGAATGTGCAATCTGATGATGAAAGTGAGGATGATGATTACATTGGGACAAAGAGGAATGAAAATGCTGCAAGTGACGATTCTGGAGAGGAAGACGATGGAAGGCATGCAAGAATGCTACAAGCAATTACTGGCATGCCGAGTGAAGCTTTTGAAGAGAATAAGAAAAAGAAGGTGATGAAGGACACTGTTATACCAGAGCTGTATCCAGAGTCTGAATATAATCCTAGTCGTGATGTTGTGGATGGTGATGGACGCATTAGCATAGAGGACCTACTGAATCCTCTTCGTGAAAAGTCTGGTTATGGAAAACTTAGGAAGAGATATCAACAAATTGAGAAGAATGCTAGAACTATTCATGTGCCACTTTCAAAGGCAGTTCAAGCAAAGGTAGAGAGGAAGGCAGCATATGAAGTATCAAAGAAAGATGTCACTAAGTGGCAGCATATTATTCAGAGAAATAGAGAGGCCCCAACTATTTTCTTTGATGAAAATGTAGATCTAGGGTTTTCAACTGTAGGAGCAATAGCTTCTGAATTTGAACCCAGAACTGAATTTGAGAAGAAAATGGCTGCTCTAGTTTATGATGATGAAGTTATGGAAGCTCATAAAAAGGATGGTTCTAAGCTTCTTGAAATGAACAAGGTCTCTATTGAAGATGAGAAGGATAGGCAAAATCGGATTGCTAAAATGCGGAGCCTTCTTTTTCGTCATGAAATGAAGGCAAAGCATATTAAAAAGATCAAGTCTAGAACATTTCATCGTTTGTTGAAGAAAGATAAATTAAAGGCAGAAGCTTCTCAGATACAAATGGACCCTGAAGCTGCTAAAGAATATGCCATGAAACAAGAGCGTCAAAGGGCTGAGGAACGCATGACTCTGAAACACAAAAACCATAATCCGTGGGCTGCACGTATTATCCAGCGTGGTTTACATAACCAAGATGAAGGAACTCGTGCTGCTATACATGAACAACTTCAAAGGCATGCTGAATTGACTAGAAAAATGAAGTCTATGAAGGGTAGCAGCAGTAGCGGGGAAGATAGCAGTGAAGAGGAAGAGGATGACAACTCTGCTGGTTCTGATCAGGACATGGATTACAAGATTTTGGGAAAAGCTAAAGAAAAAACAATGAAAGTGTTGGAGGAAGAGGAAGAAGTTCCCAAATCAGGATTGCTTTCTTTGCCTTTTATGAGGCGTGGATTGGAGAAAAGAAAAGAGGCAGCTGTTGAAGAAGCTAACCTTGCTTTCCAAGAATACGAAGATTCCTTGAAGAAGCTGGAGAATTCTGGTGGCTCAGAAGATCCAAAAGCTGCTTCTACCAGTGGCAGAAGAGTATTTGGAACGGCTAAAGCCCAGATAGATGCCAGTAATAAGGTAAAATCAGATAACTGCTATGATGGCAGTGATAGTGAGGATGACTTGGGGACCAGCAAAAGTGGCAACATAGAGAATGAGGGAAGCGACCTTTTGCATAAGGATGTAAACAAGGATTTGGTGGTAATTCAAGATGACACTGATACTCACCAGGAATCAGTTTTTAAGAACATTGATGAGATTATTAAAAAGCCTGGGCCAAAAACTACATATGAAGTTTCCATATTTGTGTCAGATACATGGAAAAAGGCAAAAAACAAAAATGAAGAAATAACGATGAAGAAGTCTCCAAAGCTTCCAGGGCTAGTTAGGCAAGCTATAAAAGATACTGAAAATGAATTTAGAGAGGATAGTGACACAGATAGTGAAGGACAGATGGTGGATGGAATTCTGTCTTCTGTTTCTAAAGTACCTTATGAACTTCCTTCTCAAGAGGAGCTCATTCGGCAAGCTTTTGCAGGCGATGATGTAGAAGATGATTTTGAAAAGGATAAGCAGGAGATCCTCAACGAAGAAAATCCTGAGCCAGAGAAGCCTCTATTACTTCCTGGCTGGGGCCAGTGGACACATGTACAGCAAAAGAAAGGTTTACCATCTTGGATGCTGAAAAAACATGAAGATGCCCAGAAAAAAAGGGCAGAAGCCCTCAAAAAGAGGAAGGATGCTCAGCTAAATAATGTGATTATATCTGAGAAAATAGACAAGAAGGCTGAGAAACTACATACTAAATCATTGCCATACCCTTTTACTTCCAAAGAGGTCTTTGAACAGAGCATGCGTGTGCCCATCGGACCTGAATATAATCCAGCAACTGCAATTGGTCCTCTTAACCGGCCGGAAgtggtaaagagaccaggggttattataaaaccaatagagttcaaagaagtgaatcctcatgaaaaaacagagcaacggaatggagataagcgtaagtttaagaaaaataaaggcaatgctggcaatatcatgaaaaaggcgaagGTGGGAGGAAAAAGTTAA 2664 0.3926 MTEKKRKERDEGNRRRLKPKKKSNTQWKKTGPRLPSSLQKHIDRLNPTTSFDSADSDDDNDVYEYEEERAEEESKKNKRYDSASVDDDLAQEIEDENVQSDDESEDDDYIGTKRNENAASDDSGEEDDGRHARMLQAITGMPSEAFEENKKKKVMKDTVIPELYPESEYNPSRDVVDGDGRISIEDLLNPLREKSGYGKLRKRYQQIEKNARTIHVPLSKAVQAKVERKAAYEVSKKDVTKWQHIIQRNREAPTIFFDENVDLGFSTVGAIASEFEPRTEFEKKMAALVYDDEVMEAHKKDGSKLLEMNKVSIEDEKDRQNRIAKMRSLLFRHEMKAKHIKKIKSRTFHRLLKKDKLKAEASQIQMDPEAAKEYAMKQERQRAEERMTLKHKNHNPWAARIIQRGLHNQDEGTRAAIHEQLQRHAELTRKMKSMKGSSSSGEDSSEEEEDDNSAGSDQDMDYKILGKAKEKTMKVLEEEEEVPKSGLLSLPFMRRGLEKRKEAAVEEANLAFQEYEDSLKKLENSGGSEDPKAASTSGRRVFGTAKAQIDASNKVKSDNCYDGSDSEDDLGTSKSGNIENEGSDLLHKDVNKDLVVIQDDTDTHQESVFKNIDEIIKKPGPKTTYEVSIFVSDTWKKAKNKNEEITMKKSPKLPGLVRQAIKDTENEFREDSDTDSEGQMVDGILSSVSKVPYELPSQEELIRQAFAGDDVEDDFEKDKQEILNEENPEPEKPLLLPGWGQWTHVQQKKGLPSWMLKKHEDAQKKRAEALKKRKDAQLNNVIISEKIDKKAEKLHTKSLPYPFTSKEVFEQSMRVPIGPEYNPATAIGPLNRPEVVKRPGVIIKPIEFKEVNPHEKTEQRNGDKRKFKKNKGNAGNIMKKAKVGGKS 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01977 887 MobiDBLite consensus disorder prediction 107 130 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 560 574 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 522 585 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 69 86 - -
Gma03g01977 887 Coils Coil 505 525 - -
Gma03g01977 887 Coils Coil 759 779 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 87 106 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 428 466 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 849 887 - -
Gma03g01977 887 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 13 863 IPR006709 GO:0006364|GO:0032040
Gma03g01977 887 MobiDBLite consensus disorder prediction 1 17 - -
Gma03g01977 887 Pfam Utp14 protein 133 848 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 1 130 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 54 68 - -
Gma03g01977 887 MobiDBLite consensus disorder prediction 849 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01977 Gma-Chr3 45469909 45475661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01977 K14567 - gmx:100784007 1661.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01977 03 45469909 45475661 Gma03g01977 03 45469909 45475661 ECH
Gma19g02010 19 49089460 49095622 Gma03g01977 03 45469909 45475661 GST