Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01975 ATGTCTTCGTCTTCTTCGGGCTTGATTTTCCGAGGGCACGAGGCCCATCCCATGGACGACGCCTATTACCCGAAGCCGCAGAAGCCATGGCTCTCCTTCGGCTACCTCCTCCGCGAACAGCGTCTCCACTTCCTCCTCCTCGGCTTTGTCCTCGCAACCCTCTTCTTCTTCCTCCTCCCATCATCGTCCCCTTCCCAACCCCTTGGAGCCCACGACCCATTCCCCACCCCTTACTTGGAGCCCACCCGCTGGCCCACCAACTCCCGAAGCTACGACGTCGTCTCCGTGCATTCCGTGGGAAAAATCCCTCTCGGGATTAAGCGGAAGGGGCTCCGGATCGTCGTCACCGGTGGGGCCGGCTTCGTCGGGTCTCACTTGGTGGATCGGTTGATTGCCCGAGGAGACAGCGTCATCGTCGTCGACAATTTTTTCACCGGAATGAAAGAAAACGTGATGCACCATTTTGGGAACCCCAACTTCGAGCTCATCCGACACGACGTCGTTGAGCCTCTCCTGTTAGAGGTCGACCAGATCTACCATCTCGCTTGCCCCGCATCCCCTGTCCATTACAAGTTTAATCCACTAGTTTTAATTCACAAGACCAACGTGGTCGGGACGCTGAACATGCTGGGACTTGCTAAAAGAGTGGGTGCTAGGTTCTTGTTAACCAGTACCAGTGAGATTTATGGTGATCCTCTGGAACACCCTCAGAAGGAAACCTATTGGGGCAACGTTAATCCCATTGGTGTTCGAAGCTGCTATGACGAGGGAAAGCGTACTGCTGAGACGTTGACCATGGATTACCACAGAGGAGCTGGAGTCGAGgtgagaatagctaggattttcaacacctacgggccacgaatgtgcttagatgatggtcgcgtcgttagtaacttcgtcgctcaggcactaaggaaggagcctttgacggtttatggggatgggaagcagactaggagttttcaatatgtttctgatttgGTGGAGGGGCTGATGCGCCTTATGGAAGGTGAACATGTTGGACCTTTCAATCTTGGAAATCCGGGTGAATTCACCATGCTTGAACTTGCCAAGGTGGTACAAGAAACAATAGATCCAGAGGCTAAGATAGAGTACAGGCCCAACACAGAGGATGACCCACACAAGAGAAAGCCTGATATTAGTAGGGCCAAGGAGCAACTGGGCTGGGAACCCAAGGTGGACCTACGGAAGGGACTCCCTCTAATGGTTTCTGACTTCCGACAACGCATTTTTGGGGACCAAAAGGAAGGAACAACCTCTGCCTAA 1290 0.4713 MSSSSSGLIFRGHEAHPMDDAYYPKPQKPWLSFGYLLREQRLHFLLLGFVLATLFFFLLPSSSPSQPLGAHDPFPTPYLEPTRWPTNSRSYDVVSVHSVGKIPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGMKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPLVLIHKTNVVGTLNMLGLAKRVGARFLLTSTSEIYGDPLEHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPEAKIEYRPNTEDDPHKRKPDISRAKEQLGWEPKVDLRKGLPLMVSDFRQRIFGDQKEGTTSA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01975 429 Gene3D - 235 419 - -
Gma03g01975 429 Gene3D - 107 234 - -
Gma03g01975 429 MobiDBLite consensus disorder prediction 368 395 - -
Gma03g01975 429 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 419 IPR036291 -
Gma03g01975 429 CDD UGD_SDR_e 112 415 - -
Gma03g01975 429 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 6 425 IPR044516 GO:0042732|GO:0048040|GO:0070403
Gma03g01975 429 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 6 425 - -
Gma03g01975 429 Pfam GDP-mannose 4,6 dehydratase 115 408 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01975 Gma-Chr3 45451307 45455235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01975 108 411 Miscellaneous Gene Families AT1G02000 25.893 1.47e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01975 K08678 - gmx:100782935 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01975 03 45451307 45455235 Gma03g01975 03 45451307 45455235 ECH
Gma19g02008 19 49075670 49079927 Gma03g01975 03 45451307 45455235 GST