Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01964 ATGCTTCCTCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCTATGTTGGTGGAACTGAAAAATGGGGAGACATATAACGGGCATTTGGTTAATTGCGACACATGGATGAACATCCATCTGCGAGAAGTCATTTGTACATCTAAAGACGGAGATAGATTTTGGAGGATGCCTGAATGCTACATACGAGGCAATACAATCAAGTACCTTCGAGTACCTGATGAGGTTATTGATAAAGTTCAAGAAGAAACCAAGAGCCGTGCAGATCGCAAACCACCTGGTGTTGGGCGTGGAAGGGGAAGAGGCAGAGAGGAAGGTCCTGGTGGGCGCCCAACAAAAGGAATTGGGCGTGGTCTTGATGATGGTGGTGCTAGGGGAGCTGGAGGAAGCCGAGGCAGGGGTGGTCCCAGTGGAAAGCCTGGTGGAAACAGAGGGCGTGGTAGAGGTTGA 447 0.5056 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREEGPGGRPTKGIGRGLDDGGARGAGGSRGRGGPSGKPGGNRGRGRG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01964 148 SUPERFAMILY Sm-like ribonucleoproteins 3 127 IPR010920 -
Gma03g01964 148 MobiDBLite consensus disorder prediction 79 109 - -
Gma03g01964 148 Gene3D - 1 83 - -
Gma03g01964 148 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Gma03g01964 148 MobiDBLite consensus disorder prediction 79 148 - -
Gma03g01964 148 PANTHER SM-LIKE PROTEIN LSM4 1 136 - -
Gma03g01964 148 SMART Sm3 5 71 IPR001163 -
Gma03g01964 148 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 136 IPR027141 GO:0006396
Gma03g01964 148 Pfam LSM domain 6 70 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01964 Gma-Chr3 45382631 45385425 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01964 K12623 - gmx:100786834 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01964 03 45382631 45385425 Gma03g01964 03 45382631 45385425 ECH
Gma19g02000 19 48994310 48996325 Gma03g01964 03 45382631 45385425 GST