Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01937 ATGTACGTGCCTTCCGCTTCTCTATCCGGTTACTCTGTGGCGATGAACAGCTTAACGGCGAGTTTCACAGCTCGAATATGCGCCACGCGCCGCGACCTACTACTCCCTATACGACACCGTTCCCTTCATCCTTTCACTACCAGACGCGTCGCCACCAAACTCACTCCTCCAAGAATCGTTTGCATGGCGGAACCTTATCTGATAACGAAGCTTGAGTCCGCCGAGAAAACGTGGAAAGAGTTATCGGTATTTATTCCACTGCGCGCTACTATGCTTTCCATTTTCTGCAAAGTTTTTTTTTTCTCAAAGATGAAATTTCAGGTCAAGCTTGCTGATCCAGACGTAGTTTCTGATCCAAAGGAGTACCAGAAGTTAGCACAATCAGTTTCAGAGCTTGATGAGGTTGTGTCCACGTATAGGAGATTTAAAGACTGTGAGAAGGTTCTAGAAGAAACCAAAGCTTTAGCGAAGGATGATGGCAACGATGAGGATATGGTGGAAATGATATCTTTTGAAATTGACACTTTGTCCAAGCAACTCGCGGAGCTTGAGGAAAAAATTAAGGTGTTACTGCTTCCCAGTGATCCTATGGATGCTAGAAACATATTGCTTGAAGTACGAGCAGGCACTGGTGGTGACGAGGCCGGAATATGGGCTGGTGATCTTGTTCGAATGTATGAAAGATATAGTGAAAGGAATTCTTGGAAGTATTCTCTTGTCTCAAGCTCTGCGGCAGAAAAAGGAGGATACAAAACTTATGTGATGGAAATAAAGGGAAATCGTGTTTACAGTAAATTGAAATATGAATCTGGTGTCCACCGAGTTCAACGGGTTCCCCTAACAGAAACTCAGGGCCGGGTACATACTTCTACTGCAACAGTGGCCATCATGCCAGAGGCTGATGAAGTTGAAGTCGTAATTGACCCAAAAGATATTGAACTGACAACGGCACGTTCTGGGGGTGCTGGAGGCCAGAATGTTAACAAGGTTGAAACAGCCATTGATCTCTTCCATAAACCAACGGGAATCCGTATCTTTTGTACTGAAGAAAGGACACAACTTAAGAACAGGAATCGCGCTTTTCAGTTGCTCCGAGCAAAACTATATGAGATTAAGGTAAGGGAGCAACAGGAGTCATTACGAAATCAAAGGAAATTACAGGTCGGTACAGGTGCACGTTCAGAAAAAATTCGAACATACAATTATAAGGACAACAGGGTTACTGACCACAGATTGAAGATAAACTATGAGCTCACCTCTTTTCTTGATGGTGATATAGAAGATGCTGTTCAGTCTTGTGTTACAATGGAGCAAAAGGAACTTCTGGAAGAACTTGCTGAATCTGTGGGTGCTCCGGCTGGCTGA 1365 0.441 MYVPSASLSGYSVAMNSLTASFTARICATRRDLLLPIRHRSLHPFTTRRVATKLTPPRIVCMAEPYLITKLESAEKTWKELSVFIPLRATMLSIFCKVFFFSKMKFQVKLADPDVVSDPKEYQKLAQSVSELDEVVSTYRRFKDCEKVLEETKALAKDDGNDEDMVEMISFEIDTLSKQLAELEEKIKVLLLPSDPMDARNILLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLRNQRKLQVGTGARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVGAPAG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01937 454 PANTHER LD18447P 37 83 - -
Gma03g01937 454 PANTHER LD18447P 105 452 - -
Gma03g01937 454 Coils Coil 166 186 - -
Gma03g01937 454 Pfam PCRF domain 106 294 IPR005139 GO:0006415
Gma03g01937 454 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 318 334 IPR000352 GO:0003747|GO:0006415
Gma03g01937 454 Gene3D - 309 370 - -
Gma03g01937 454 TIGRFAM prfA: peptide chain release factor 1 105 447 IPR004373 GO:0006415|GO:0016149
Gma03g01937 454 SMART PCRF_a_2 154 269 IPR005139 GO:0006415
Gma03g01937 454 Pfam RF-1 domain 301 411 IPR000352 GO:0003747|GO:0006415
Gma03g01937 454 SUPERFAMILY Release factor 105 442 IPR045853 -
Gma03g01937 454 Gene3D - 104 196 - -
Gma03g01937 454 PANTHER PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC 37 83 - -
Gma03g01937 454 PANTHER PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC 105 452 - -
Gma03g01937 454 Gene3D - 198 308 - -
Gma03g01937 454 Hamap Peptide chain release factor 1 [prfA]. 67 446 IPR004373 GO:0006415|GO:0016149
Gma03g01937 454 Gene3D - 371 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01937 Gma-Chr3 45214392 45220316 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01937 K02835 - gmx:100777225 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01937 03 45214392 45220316 Gma03g01937 03 45214392 45220316 ECH
Gma19g01978 19 48848013 48854060 Gma03g01937 03 45214392 45220316 GST