Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01920 ATGCTCGGAGCTTGGAAGAGTAAACCGCAATTTCCTCCAGTGTGTGTGTCTGCATTTGAGCTACTTTTTTGGCAGAAAATCATGTTAAGAATGGGTTTGAGGAAGCTACAAGACAAGGTTGCGCTGATCACAGGCGCAGCTAGTGGAATAGGAAAAGCCACAGCTACAAAATTCATCAATAATGGAGCCAAGGTTATTATTGCTGATATTGATCAAGAGCTTGGCCAAGAGACTGCAAAAGAACTAGGACCTAATGCTACTTTCATAGCATGTGATGTTACTCAAGAGTCAGACATTTCCAATGCTGTTGATTTGGCCGTTTCTAAACACAAACAACTTGATATCATGTACAACAATGCAGGAATAGCCTGCAGAAGTCCTCTAAGCATTGTTGACTTGGACCTGGAACTGTTTGACAAAGTCATGGACATAAATGTTCGTGGCGTTGTGGCAGGCATCAAGCATGCAGCACGTGTAATGATCCCACGTGGAAGTGGGTCCATTCTCTGCACAGCAAGTGTCACAGGTGTGATAGGAGGGGTGTCACAACACACTTACTCAATATCCAAGTTTGCAGTTGTGGGCATTGTTAAATCTCTGGCTTCTGAGCTATGCAGGCATGGAATCCGGGTCAATTGCATATCACCTTTTGCCATCCCCACTCCTCTTGTCATGGGAGAAATGAGTCAGATATATCCTCATGTTGATGCTCAGAGACATGAGGACATTGTTCACAATGCTGGTGTCTTAAAGGGAGCAAATTGTGAACCCAATGATATTGCTAATGCTGCACTTTTCCTTGTGTCTGATGATGCCAAATATGTTAGTGGACACAACTTGGTTGTGGATGGAGGTTTCACATCTTTTAAGAATTTGGACTTGCCTGCACCAAATCAAGTGCAGTAG 906 0.436 MLGAWKSKPQFPPVCVSAFELLFWQKIMLRMGLRKLQDKVALITGAASGIGKATATKFINNGAKVIIADIDQELGQETAKELGPNATFIACDVTQESDISNAVDLAVSKHKQLDIMYNNAGIACRSPLSIVDLDLELFDKVMDINVRGVVAGIKHAARVMIPRGSGSILCTASVTGVIGGVSQHTYSISKFAVVGIVKSLASELCRHGIRVNCISPFAIPTPLVMGEMSQIYPHVDAQRHEDIVHNAGVLKGANCEPNDIANAALFLVSDDAKYVSGHNLVVDGGFTSFKNLDLPAPNQVQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01920 301 Gene3D - 30 293 - -
Gma03g01920 301 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 32 293 - -
Gma03g01920 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 287 IPR036291 -
Gma03g01920 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 111 122 IPR002347 -
Gma03g01920 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 IPR002347 -
Gma03g01920 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 IPR002347 -
Gma03g01920 301 PRINTS Glucose/ribitol dehydrogenase family signature 40 57 IPR002347 -
Gma03g01920 301 PRINTS Glucose/ribitol dehydrogenase family signature 111 122 IPR002347 -
Gma03g01920 301 PRINTS Glucose/ribitol dehydrogenase family signature 160 176 IPR002347 -
Gma03g01920 301 PRINTS Glucose/ribitol dehydrogenase family signature 186 205 IPR002347 -
Gma03g01920 301 PRINTS Glucose/ribitol dehydrogenase family signature 207 224 IPR002347 -
Gma03g01920 301 PRINTS Glucose/ribitol dehydrogenase family signature 250 270 IPR002347 -
Gma03g01920 301 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 173 201 IPR020904 GO:0016491
Gma03g01920 301 Pfam Enoyl-(Acyl carrier protein) reductase 45 287 - -
Gma03g01920 301 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 32 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01920 Gma-Chr3 45060489 45062931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01920 33 286 Acyl Lipid Metabolism Gene Families AT1G24360 29.008 4.61e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01920 - - gmx:100814306 526.554