Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01806 ATGAGAGCAAGCCTCGTTCATAACAAGCTTATGCTTGGGTGCTACTGCAATGTGCAAGAGTTATATTGTTATTTGAATCGTAGGCGGGCGTGGAAGCGTTCACACGAAGCAACTCCGTTCTTCAGCCTCTCAAACGCAACTTCATTATCCAATTGCCTTCGCAAAATGTCGGGGAAGCGAAAGAGGAAGTTGAAATTGTTAAGCGATGCAATCACAGATAATAGAAGAAAAACAGTTGCTGAGGTGAAAACTGAAAATTTGGAGCTGCAATCCTGGGCTGATCTCCCTGCTGAACTCTTAGAATCGATCTTGTCCCGATTGATTCTAGTGGATAACATCCGGGCTTCTTCTGTTTGCAAGAGATGGCATTCTGTTGCCAGTGATCATAAGACACTCACCTTCGAGTTGCCAGAGTTGAATGGATCTAGAGTTTGTTATACAAAAGATGGTTGGTTATTGCTATACCGGCCCAGAACTCACCGAGTATTCTTCTTTAATCCCTTTACTCGGGAGCTGATCAAACTGCCAAGATTTGAGATGACATACCAGATTGTGGCCTTCTCTTGTGCTCCAACATCACCTGGCTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTAGCTATTAGCACTTGTTATCCTGGGGCAACAGAATGGACCACTGTTAATTACCAAAACCGCTTGCCCTTTGTCAGTAGCATTTGGAATAAGCTTGTGTTTTGTAATGGGCTATTTTATTGTCTGAGCCTCACAGGTTGGCTTGGTGTGTTTGATCCAGTTGAATGTACTTGGAGTGTTCTGGCAGTACCTCCACCCAAATGCCCAGAGAACTTTTTTGCCAAAAACTGGTGGAAGGGAAAATTTATGGCAGAGCATGAAGGAGATATATTAGTAATTTATACATGCTGTAGTGAAAATCCCATTATTTTTAAGTTAGATCAGACATTAATGAAATGGGAAGAGATGACAACACTAGATGGGGTAACTCTTTTTGCTAGTTTTTTGTCATCTCATTCAAGGACTGACCTCATTGGAATAATGAGGAACAGTGTCTACTTCTCCAAAGTTCGTTTCTATGGAAAGCGTTGCATATCATTCTCTCTTGGACTTTTCAGCTTGCATGTGAAGAATTTTAGTGAAACAACATTTTTTATTCATCCTAAAGTCCTAATGCAGAACATGTGA 1191 0.4123 MRASLVHNKLMLGCYCNVQELYCYLNRRRAWKRSHEATPFFSLSNATSLSNCLRKMSGKRKRKLKLLSDAITDNRRKTVAEVKTENLELQSWADLPAELLESILSRLILVDNIRASSVCKRWHSVASDHKTLTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECTWSVLAVPPPKCPENFFAKNWWKGKFMAEHEGDILVIYTCCSENPIIFKLDQTLMKWEEMTTLDGVTLFASFLSSHSRTDLIGIMRNSVYFSKVRFYGKRCISFSLGLFSLHVKNFSETTFFIHPKVLMQNM 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01806 396 ProSiteProfiles F-box domain profile. 89 136 IPR001810 GO:0005515
Gma03g01806 396 PANTHER OS09G0392200 PROTEIN 128 371 - -
Gma03g01806 396 PANTHER OS09G0392200 PROTEIN 62 126 - -
Gma03g01806 396 SUPERFAMILY F-box domain 87 167 IPR036047 GO:0005515
Gma03g01806 396 Pfam F-box-like 92 130 IPR001810 GO:0005515
Gma03g01806 396 SMART fbox_2 95 136 IPR001810 GO:0005515
Gma03g01806 396 PANTHER OS09G0392200 PROTEIN 128 371 IPR044619 -
Gma03g01806 396 PANTHER OS09G0392200 PROTEIN 62 126 IPR044619 -
Gma03g01806 396 Gene3D - 85 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01806 Gma-Chr3 44111570 44116305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01806 - - gmx:100782045 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01806 03 44111570 44116305 Gma03g01806 03 44111570 44116305 ECH
Gma19g01845 19 47705601 47714112 Gma03g01806 03 44111570 44116305 GST