Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01797 ATGCCGTCGATACCAGAAGAACGACTCCTGACTCCGAACCCAGACCGGTTCTGCATGTTCCCAATCCAATACCCTCAAATCTGGGAAATGTATAAGAAAGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTGGACCTCTCGCAGGACCTCCGCCACTGGGCCACCCTCAGCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTAGAAAACCTCGCCGGCCGCTTCACCAAAGAAATCCAACTCCCGGAGGCCCGCGCTTTCTACGGCTTCCAAATCGCCATCGAAAATATCCACTCCGAAATGTACAGCCTCCTCTTAGAAACCTACATCAAAGACTCCACAGAAAAAAATCGTCTGTTTCGCGCCATAAACACCATCCCATGCATCACCAAAAAAGCCCAGTGGGCCCTCCGCTGGATCGATGCCTCAGAATCCTTCGCGGAGCGCCTCGTGGCATTCGCTTGCGTCGAGGGAATATTCTTCTCCGGAAGCTTTTGCGCGATATTTTGGCTCAAGAAGCGTGGGTTAATGCCGGGGCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAGGGGCTTCACTGCGACTTCGCGTGTCTCTTGTACTCGCTTCTCAGGAAGAAGCTTAGTGAGGAGCGCGTGAGGGAGATTGTGCGTGACGCGGTGGAGATTGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGTGCGTTGGTGGGGATGAACGGGGAGTTGATGAGTCGGTATATTGAGTTTGTTGCGGATCGGTTGCTGGATGCGCTTGGGTGTGGGAAGGTGTACGGTGCTCAGAATCCCTTTGATTGGATGGAGCTTATTTCGCTTCAGGGGAAAACTAACTTCTTTGAGAAGCGCGTTGGGGAGTACCAGAAGGCTTCTGTTATGTCTAGCTTGAATGGTAATGGAGGGGCGCATGTCTTCAAGATGGATGAGGATTTTTAA 990 0.5424 MPSIPEERLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWATLSDGERHFITHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETYIKDSTEKNRLFRAINTIPCITKKAQWALRWIDASESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVREIVRDAVEIEREFVCDALPCALVGMNGELMSRYIEFVADRLLDALGCGKVYGAQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGAHVFKMDEDF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01797 329 Coils Coil 218 238 - -
Gma03g01797 329 PIRSF NrdB 2 316 IPR000358 GO:0009263
Gma03g01797 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Gma03g01797 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 IPR000358 GO:0009263
Gma03g01797 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Gma03g01797 329 SUPERFAMILY Ferritin-like 4 307 IPR009078 -
Gma03g01797 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 - -
Gma03g01797 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Gma03g01797 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01797 Gma-Chr3 44059702 44060792 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01797 K10808 - gmx:100779885 672.159