Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01771 ATGGTTTACACCATCTCGGGAATTCGATTTCCGGTTTTTCCTTCGCTGCACAACTTGAGCTTCCGTGGCGATCGCAGAACTGCGTCTCTTCCCGTTTTTCTCCGAAACAACTCCTTCTCTCGGAAAACCCTTGCTGTAAAATCTTCCCATGATTCTGATTCCTTGTCTTCTGCGATTGCCGAATCTGATAAAGTACTTATTCCTCAAGATCAAGATAACTCTGCATCCTTGACAGATCAACTTGAAACTCCTGATATAACCTCAGAGGATGCACAGAATTTAGAGGATTTAACCATGGAAGATGAGGATAAATACAACATTAGTGAAGCAGCTAGCGGTTACAGACAGATTGAAGATGGACAGGGCTCTGTTGTATCATCACTTGTAGATGTGAGCATTCCGGCCAAGAAGATGTCGGTATCTGTTGGTAGGAAAGCAAAGATAGTAAGTGATGAAGTTAAACCTAAGATCATTCCCCCACCTGGCGCTGGGCAGAAAATATATGAGATAGATCCATCTTTGCTAGCTCACCGTGAGCATCTTGATTTCCGTTATGGACAATACAAAAGATTGCGTTATGAAATTGACAAGCATGAAGGCGGTCTGGATACATTTTCACGTGGTTATGAAAAATTTGGCTTCCAACGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCTAAGTCGGCAGCATTAATTGGAGACTTCAACAATTGGAATCCAAATGCAGATGTAATGACCAAGAATGAATTTGGTGTGTGGGAGATCTTCTTGCCGAACAATGTGGATGGTTCACCACCAATTCCTCATGGTTCTCGGGTCAAGATCCGCATGGATACGCCCTCTGGAATCAAGGACTCAATTCCTGCTTGGATTAAGTTTTCTGTACAGGCACCTGGTGAAATTCCATATAGCGGAATATACTATGATCCCCCAGAAGAGGAAAAATATGTCTTCAAACATCCACTGCCAAAGAGACCAAAATCACTTAGAATATATGAGTCACACATCGGAATGAGTAGTCCGGAGCCAAAAATCAACACATATGTCAATTTTAGAGATGATGTATTGCCTCGAATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAACATTCTTATTATGCAAGCTTTGGGTACCATGTTACAAATTTCTTCGCACCTAGCAGCAGATTTGGAACTCCAGAGGAACTTAAGTCTCTGATAGACAGAGCCCATGAACTGGGTCTGCTTGTTCTGATGGATATTGTACACAGCCATGCATCAAATAATACATTGGATGGGCTGAACATGTTTGATGGAACTGATGGTCATTACTTCCATCCTGGGTCACGAGGTTATCATTGGATGTGGGATTCTCGCCTTTTTAACTACGGAAGCTGGGAAGTTCTAAGGTATCTACTCTCGAATTCAAGATGGTGGCTGGATGAATACAAGTTTGATGGATTTCGATTTGATGGTGTTACATCAATGATGTACACTCATCATGGATTGGAGGTAGCATTTACTGGAAATTACAATGAGTATTTTGGTTTTGCAACTGATGTTGATGCTGTGATTTACCTGATGCTGACTAATGATGTCATTCATGGGCTGTTCCCTGAGGCTGTTACAATTGGTGAAGATGTGAGTGGAATGCCAACAGTCTGCCTTCCTACGCAAGATGGTGGGGTTGGCTTTGATTATCGCCTGCACATGGCCATTGCAGACAAGTGGATTGAGATTCTCAAGAAGAATGATGAAGACTGGAAAATGGGTGATATTGTCCACACATTAACAAACAGAAGGTGGCTGGAAAAATGTGTAGCTTATGCTGAAAGTCATGACCAGGCCTTGGTTGGTGACAAGACAATTGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCATCCACACCTATTATAGATCGTGGTATAGCGTTGCACAAAATGATTAGGCTTATTACCATGGGTCTTGGTGGTGAAGGGTATTTAAATTTTATGGGGAATGAATTTGGCCATCCTGAGTGGATTGATTTTCCAAGGGGTGATCAACATCTTCCTACTGGCGTAATAGTTCCAGGGAATAACAACAGTTTTGATAAATGCAGGCGTAGATTTGACTTGGGTGATGCGGACTATCTAAGATATCGAGGGATGCAAGAATTTGATCAGGCCATGCAGCATCTAGAAGAAAAGTTTGGTTTCATGACTGCTGAGCACCAATATATTTCACGGAAAAATGAAGGTGACAAAATTATAGTCTTCGAAAGGGGCAACCTCATCTTTGTCTTCAATTTTCATTGGAACAACAGCTATTCAGATTACAGAGTTGGCTGTTCAACCCCTGGGAAATATAAGATTGTCTTGGATTCAGATGATGCCTTGTTCGGTGGCTTCAGTCGGCTCAATCACACTGCTGAGTACTTCACCTCAGAAGGATGGTATGATGACCGACCTCGATCCTTTCTTATCTATGCACCTTCTAGAACAGCAGTGGTTTAtgcccttgcagatgatgttgaacctaccctagcagatgaagctgaacctgccctagcagatgaagctgaaccAGAGCCAGTTGATCCTTGA 2613 0.4114 MVYTISGIRFPVFPSLHNLSFRGDRRTASLPVFLRNNSFSRKTLAVKSSHDSDSLSSAIAESDKVLIPQDQDNSASLTDQLETPDITSEDAQNLEDLTMEDEDKYNISEAASGYRQIEDGQGSVVSSLVDVSIPAKKMSVSVGRKAKIVSDEVKPKIIPPPGAGQKIYEIDPSLLAHREHLDFRYGQYKRLRYEIDKHEGGLDTFSRGYEKFGFQRSATGITYREWAPGAKSAALIGDFNNWNPNADVMTKNEFGVWEIFLPNNVDGSPPIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPYSGIYYDPPEEEKYVFKHPLPKRPKSLRIYESHIGMSSPEPKINTYVNFRDDVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEELKSLIDRAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDGHYFHPGSRGYHWMWDSRLFNYGSWEVLRYLLSNSRWWLDEYKFDGFRFDGVTSMMYTHHGLEVAFTGNYNEYFGFATDVDAVIYLMLTNDVIHGLFPEAVTIGEDVSGMPTVCLPTQDGGVGFDYRLHMAIADKWIEILKKNDEDWKMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPIIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPTGVIVPGNNNSFDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEEKFGFMTAEHQYISRKNEGDKIIVFERGNLIFVFNFHWNNSYSDYRVGCSTPGKYKIVLDSDDALFGGFSRLNHTAEYFTSEGWYDDRPRSFLIYAPSRTAVVYALADDVEPTLADEAEPALADEAEPEPVDP 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01771 870 SUPERFAMILY (Trans)glycosidases 323 738 IPR017853 -
Gma03g01771 870 Gene3D Glycosidases 171 740 - -
Gma03g01771 870 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 20 848 IPR037439 GO:0003844|GO:0005978
Gma03g01771 870 SMART aamy 350 710 IPR006047 GO:0005975
Gma03g01771 870 Gene3D - 745 850 IPR013780 -
Gma03g01771 870 Pfam Alpha amylase, C-terminal all-beta domain 749 842 IPR006048 GO:0003824|GO:0005975|GO:0043169
Gma03g01771 870 Pfam Alpha amylase, catalytic domain 360 431 IPR006047 GO:0005975
Gma03g01771 870 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 20 848 - -
Gma03g01771 870 CDD E_set_GBE_euk_N 219 312 - -
Gma03g01771 870 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 211 294 IPR004193 GO:0004553|GO:0005975
Gma03g01771 870 Gene3D Immunoglobulins 207 319 IPR013783 -
Gma03g01771 870 SUPERFAMILY E set domains 205 314 IPR014756 -
Gma03g01771 870 SUPERFAMILY Glycosyl hydrolase domain 746 844 - -
Gma03g01771 870 CDD AmyAc_bac_euk_BE 316 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01771 Gma-Chr3 43806182 43823559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01771 27 845 Glycoside Hydrolase AT5G03650 74.847 0.0 1296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01771 K00700 - gmx:100816963 1753.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01771 03 43806182 43823559 Gma03g01771 03 43806182 43823559 ECH
Gma19g01817 19 47456087 47474841 Gma03g01771 03 43806182 43823559 GST