Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01736 atggacgcacctcgtaaacagcagGTTTCGTTGAGAGGAGCAAGTGCGAAGGAGATAACAAGAGACGCGCTTCTTCAGAAGGTCTCTCAGGAAAGAGAACTTCGCAATTACGCAAAAAGAGCTGCTGCTGCTGCGCTCTTCATTCAGAGAGTATGGAGACGCTTCAAGGTCACAAAGATGATTTCCCTGCAGCTTCAGCAGGAATGGGAGATAGCGGTGAATCATTATACTGGTGTGATGACAGCAAATTGGATTTCAAACGATTTGTTGAGACCATTTCTGTTCTTTATCACCCGTATCTCAACTAAGCATTGGAAGGTCCACAGCAAGAGAATAGATTCTATGAAGCTGTGCTTTACAATCCTACTGGAAAGCCTGAAATCTTCTGATTCAAATCAGAACTTTTGCATTCTGGCAATTGGTACAACTGAAGAAAGAACAATATGGAGATACCAGGCACGACAGCTGACTTCTCTTAGTTTTTTCATTCTTTTGGAGTTTAGTGAATGCAATTCAAGGGCTCAAGATATTACTATTGTCACATCTCTAGCTATGCGTGTTCTTGTAATGTTAACTGATCTGAAAGGATGGAAAGGCATTACAGATGACAACCACTTAGATGCAGATTTAGCAGTGAAAGATTTAATTCAGTTCCTGGGGGGTAATAAAAGTGGTTGTTATGTGTCTATTGGCAGATATATTAGTGCATTAGAAAATCATTCCTCTCAGTCAAAGAGTATCACCCAGGCAGATGATTTTTTTTTCATTACTGCAAGTGCAATAACTATAGCTGTGCGGCCATTTTATCTGACAAACTATGATGTAGAAGTGCCTGGTGCACTGGATGTCAACCATGCTGCTGAGCAGTTTTTTGTTTATCTTCTGACTATACCTTGGCTAGTGCAACATCTCCCACCTGTTCTTCTACCTGCTTTAAAGCACAAATCTATTTTGTTTCCATGCTTCCAGACTCTATTGACTTTGAAAGAGAAAGTTTTGCCAGAGATGTCAGAGTTTGTCAAATCAGAAATACTTGTCTCTTTCAAGGCTATTCCACCAGTTGGTTGGGCTCTCACTAACAGTATATGCCTCGCAACAGGGAATGAGATTGAATCCTTCAATCAAGGTTTAGAGTATGCATTGTATGTCCGTGTTGTTACTACTCTAGCAGAGGCCCTACTGGCTTGTCTTGATAACATTGGATGGGTCAAAAGGAAAAATAAATCCCTTCAAACTGATGTTGAAAGTTCAACACAGCCAGTTGATACAATTCAGCATGAGGGTGAAGCAACCAATGAATCCTTAATAATGTCATACATGGATCAATTTAGGCCTGTTTGTCAGCAGTGGCATCTCAAAAATCTTTTGGCATCAATAGATAGAGATGCCACTAACAAGGCTGAGGCTGTGCTCTCAAATGGCCTTGCATGTCTGGGGAAGCTAGAATTGTGTGATGTTGCACTTTTTTATTCTAACTTACTTAGAATATTTTCAGTTTTGAGTCCAATTCGTGGCTCATTGTCAGTTCTCAACATGCTAGCATTCACTCCTGGATTTCTTGTGAGATTGTGGGGTGTACTGGAGGATTCCTTTTTTTCTGAAGACAAACATAATTCTGATAATCACACAAGTGAAAGCAGCAAACATAAAGCCTTTGAGAAGATGCAAAAACATGTCAGTAAAGACGGGGCTAATAAGTGGGTCAGCGTACTTCATAAATTTACAGGAAAGTCACAAGCAACAACGGATTGCACAGATTCCATTGGCAGTCACTCTGAGCCTAGCAGAGTGAATGATGATTCATCAGATGTATGGGACATAGAACCTATGAGGCATGGTCCACAAGGCGTTCCAAAGGATATGTTTGCCATGCTTCATCTTTTCTGTGCAACCTATTCTCACCTGCTTTTAGTTCTTGATGACATAGAGTTCTATGAGAAACAGGTTCCATTCAAAATAGAGCAGCAAAGAAGAATTGCGTCGATGCTCAATACCCTGGTTTATAATGGCTTGTCCCATGTTAGTGGTCATCATAATAGGCCTCTCATGGATTGTGCAGTCAGATGCTTACATTTACTGTATGAAAGGGATTGCAGACACCCATTTTGTCCTCCTGCTTTGTGGCTTTCTCCTGCTAGAAAAAGTCGGCCACCAATTGCAGTTGCTGCCAGAACTCATGAAGTTTTAGCAGCCAACCTGAGATCTGATGATTCATCAGCTTCACTGAGTGTCGGTTCTGTTGTCACCATTGCTCCTCATGTTTTCCCTTTTGAGGAGAGAGTTGAGATGTTTCGTGAATTTATCAAGATGGATAAAGCATCCCGAAAAATGGCTGGTGAAATTTCTGAACCTGGTTCACGAGCCATTGAGATAGTAGTACGTCGGGGTCATATTGTTGAAGATGGATTTCGGCAATTAAATTCCCTTGGGTCAAGGTTGAAGTCATCCATCCATGTATCATTTGTCAGTGAATGTGGTCTTCTTGAGGCTGGCCTGGACTATGGTGGATTATCTAAAGAGTTTCTGACTGACATATCAAAATCAGCATTTTCTCCTGAATATGGACTCTTTTCCCAAACCTCGACTTCAGACAGACTTCTAATTCCAACTGCATCTGCCAGATATTTGGAGAATGGTCTTCAGATGATTGAATTCCTTGGAAGAGTAGTGGAGCTATACAGGAATCTTATGTATGTCAAGAATTATGACGGTGATGTTAAGGAGCTCTCTATTGATTTCACAGTTACTGAAGAATCATTGGGCAAAATGTATGTGGTGGAACTTAAGTCCGGTGGCAAAGATATTTCTGTGACAAATGAGAACAAGATGCAGTACATACATGCAATGGCAGACTACAAACTCAACCAACAGATATTGCCATTTTCAAATGCATTTTATAGAGGGGTAACTGATCTTATTACTCCATCCTGGTTGAAGTTATTCAACGCTAGTGAATTTAATCAGTTGCTTTCAGGTGGTAATTATGATATTGACGTTGATGATTTGAAAAACAACACACGATACACTGGTGGTTACAATGAGGGACGCCGGACAATCAAGATTTTTTGGCAGGTAATTAAAGGCTTTGAACCTAAAGAGCGCTGCATGCTTCTTAAATTTGTCACCAGTTGTTCTCGTGCTCCATTACTTGGGTTCAAATACTTGCAGCCACCTTTTACCATCCACAAGGTTGCATGTGATGTTCCTCTTTGGGCAACAATTGGAGGACAAGATGTAGATCGACTTCCATCAGCTTCAACCTGCTACAATACTCTTAAGCTTCCAACATACAAACGTCCAGGCACTTTGAGAGCAAAGCTTCTATATGCCATCAGTTCAAATGCCGGATTTGAACTTTCTTGA 3363 0.405 MDAPRKQQVSLRGASAKEITRDALLQKVSQERELRNYAKRAAAAALFIQRVWRRFKVTKMISLQLQQEWEIAVNHYTGVMTANWISNDLLRPFLFFITRISTKHWKVHSKRIDSMKLCFTILLESLKSSDSNQNFCILAIGTTEERTIWRYQARQLTSLSFFILLEFSECNSRAQDITIVTSLAMRVLVMLTDLKGWKGITDDNHLDADLAVKDLIQFLGGNKSGCYVSIGRYISALENHSSQSKSITQADDFFFITASAITIAVRPFYLTNYDVEVPGALDVNHAAEQFFVYLLTIPWLVQHLPPVLLPALKHKSILFPCFQTLLTLKEKVLPEMSEFVKSEILVSFKAIPPVGWALTNSICLATGNEIESFNQGLEYALYVRVVTTLAEALLACLDNIGWVKRKNKSLQTDVESSTQPVDTIQHEGEATNESLIMSYMDQFRPVCQQWHLKNLLASIDRDATNKAEAVLSNGLACLGKLELCDVALFYSNLLRIFSVLSPIRGSLSVLNMLAFTPGFLVRLWGVLEDSFFSEDKHNSDNHTSESSKHKAFEKMQKHVSKDGANKWVSVLHKFTGKSQATTDCTDSIGSHSEPSRVNDDSSDVWDIEPMRHGPQGVPKDMFAMLHLFCATYSHLLLVLDDIEFYEKQVPFKIEQQRRIASMLNTLVYNGLSHVSGHHNRPLMDCAVRCLHLLYERDCRHPFCPPALWLSPARKSRPPIAVAARTHEVLAANLRSDDSSASLSVGSVVTIAPHVFPFEERVEMFREFIKMDKASRKMAGEISEPGSRAIEIVVRRGHIVEDGFRQLNSLGSRLKSSIHVSFVSECGLLEAGLDYGGLSKEFLTDISKSAFSPEYGLFSQTSTSDRLLIPTASARYLENGLQMIEFLGRVVELYRNLMYVKNYDGDVKELSIDFTVTEESLGKMYVVELKSGGKDISVTNENKMQYIHAMADYKLNQQILPFSNAFYRGVTDLITPSWLKLFNASEFNQLLSGGNYDIDVDDLKNNTRYTGGYNEGRRTIKIFWQVIKGFEPKERCMLLKFVTSCSRAPLLGFKYLQPPFTIHKVACDVPLWATIGGQDVDRLPSASTCYNTLKLPTYKRPGTLRAKLLYAISSNAGFELS 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01736 1120 Gene3D Hect, E3 ligase catalytic domain 895 957 - -
Gma03g01736 1120 MobiDBLite consensus disorder prediction 582 604 - -
Gma03g01736 1120 Gene3D Hect, E3 ligase catalytic domains 753 894 - -
Gma03g01736 1120 CDD HECTc 789 1118 IPR000569 GO:0004842
Gma03g01736 1120 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 3 1120 - -
Gma03g01736 1120 Gene3D Hect, E3 ligase catalytic domains 958 992 - -
Gma03g01736 1120 Gene3D Hect, E3 ligase catalytic domain 995 1119 - -
Gma03g01736 1120 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 3 1120 IPR044611 GO:0000209|GO:0061630
Gma03g01736 1120 SMART hect_3 807 1120 IPR000569 GO:0004842
Gma03g01736 1120 SUPERFAMILY Hect, E3 ligase catalytic domain 789 1113 IPR035983 GO:0004842
Gma03g01736 1120 ProSiteProfiles HECT domain profile. 813 1120 IPR000569 GO:0004842
Gma03g01736 1120 Pfam HECT-domain (ubiquitin-transferase) 891 1120 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01736 Gma-Chr3 43464892 43474678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01736 K10588 - gmx:100527169 2108.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01736 03 43464892 43474678 Gma03g01736 03 43464892 43474678 ECH
Gma19g01786 19 47121254 47132706 Gma03g01736 03 43464892 43474678 GST