Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01733 ATGGGGAAGAGTAGCGGAAGAGACCGAAGACGAAGAAGATCACATGACtctgaatccgactcaccttccgattccgactccgacagacgccaccgtagcaatagtcgccggtcacggcgggactccgatggcgacaggaagatgaagtcctcgaagtctgaatccgagtcgccttccgattccgactccgacatacgccaccgtagtagcagccgccggtcgtggcgggactccgacggcgataggaagaAGTCCTCGAGGAGCATCACAGAAGAGGAAATTACAAAGTACATGGCCAGAAAGGCCCAATCGAAGGCAATGAAAGTAGCGAAAAAGTTGAAAACCAGTACGGTATCGGGCTATTCCAACGATTCGAATCCGTTTGGTGACTCTAATCTCAACGAGAAGTTTGTCTGGCGCAAGAAGATTGAGCGCGATGTTTCACAAGGTGTGTCTATTGATGCGTTTTCAATGAAGGCAGAGAAAAAGAAACAGAGAGAAAGGATGGCAGAAATTGAAAAAGTAAAAAAGAGAAGAGAGGAAAGGGCACTTGAGAAAGCAAGGCACGAGGAAGAAATGGCACTGTTAGCCAGAGAGCGTGCTCGAGCTGAGTTTCAGGACTGGGAAAAAAAAGAAGAGGAGTTTCATTTTGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCCAGACCCATCGATGTCCTAACCAAGCATCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACTGTGAACGAAATGAGTGAGCTACGTGACGACATCAAAATGCATCTAGACCTTGACAGGGCAACACCAACTCATGTAGAATATTGGGAGGCACTCCTTCTGGTTTGTGATTGGGAGCTAGCTGAAGCTCAAAGAAAGGATGCACTTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGCTGCTTGCAGAAGAAAGGGGTCTGCATTCCAGTGTTGAGCCAGATGTGAAGAGGCTTTTGCAGGGGAAGACACTTGCAGAGTTGGAGGCTTTACGGGTTCACATTGAATCAGAAATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACATCTCCACATTTATAAGGCCAAGGCTTGTTTAAAGGAAATTCATGCTAAATTGCTACGTAAGCATTTGCAATCTCTTGAGAGACCATTGGAGGATGAAGATAAATTGGAGAATGCTCATGTTATGATACCTGAGGAGGAAGATACTGAAGATGATATTAAAGTCCAATCTGCAGATGAATCATTCTCACCAGAGCCCATTAGAGAGGATCAAGAAGCTGATGATGAGGCTGGATCATTTTCACCACAACTGTTGCACGGTGATGAAAATGCGGAAGCTATTGACCCAGAAGAAGATAGAGCCATGCTGGAGCGGAATCGTAAGGCTGTATTAGAAGAGCAGCAAAGACGAGTTCAGGAAGCAATGGCATCAAAGCCAACTCCTTCTGAAGATCATTTTGAGATGAAGGCCTTAAAAGCTATGGGGGATATGGAAGATGGAGACTCTGTGTTTGGATCTGGTGCTGAAGTGAATCTGGATTCCCAGgtttattggtggcatgacaaatacaggcctaggaagcCGAAGTATTTCAACCGTGTTCACACTGGATATGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAACCCACCTCCAAAGATAGTCCAAGGGTACAAATTTAATATTTTCTACCCTGATCTTGTAGACAAGACAAAAGCCCCAACCTACACCATTGAGAAGGATGGCAGCAATGGGGAGACTTGCATTATAAGATTCCATGCAGGGCCACCATATGAAGACATAGCTTTCCGCATTGTTAACAAAGAATGGGAGTATTCTCATAAGAAAGGTTTTAAGTGTGCATTTGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGCTACCGAAGATAA 2013 0.3855 MGKSSGRDRRRRRSHDSESDSPSDSDSDRRHRSNSRRSRRDSDGDRKMKSSKSESESPSDSDSDIRHRSSSRRSWRDSDGDRKKSSRSITEEEITKYMARKAQSKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIDAFSMKAEKKKQRERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVNEMSELRDDIKMHLDLDRATPTHVEYWEALLLVCDWELAEAQRKDALDRARVRGEEPPAELLAEERGLHSSVEPDVKRLLQGKTLAELEALRVHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKLLRKHLQSLERPLEDEDKLENAHVMIPEEEDTEDDIKVQSADESFSPEPIREDQEADDEAGSFSPQLLHGDENAEAIDPEEDRAMLERNRKAVLEEQQRRVQEAMASKPTPSEDHFEMKALKAMGDMEDGDSVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCAFERGILHVYFNFKRHRYRR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01733 670 Pfam Conserved mid region of cactin 198 395 IPR018816 -
Gma03g01733 670 MobiDBLite consensus disorder prediction 11 93 - -
Gma03g01733 670 MobiDBLite consensus disorder prediction 408 423 - -
Gma03g01733 670 PANTHER BNAC05G02180D PROTEIN 2 670 - -
Gma03g01733 670 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 2 670 - -
Gma03g01733 670 Coils Coil 162 206 - -
Gma03g01733 670 MobiDBLite consensus disorder prediction 408 476 - -
Gma03g01733 670 SMART CactinC_cactus_3 546 670 - -
Gma03g01733 670 MobiDBLite consensus disorder prediction 1 93 - -
Gma03g01733 670 Pfam Cactus-binding C-terminus of cactin protein 546 670 IPR019134 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01733 Gma-Chr3 43439341 43445898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01733 K25058 - gmx:100805202 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01733 03 43439341 43445898 Gma03g01733 03 43439341 43445898 ECH
Gma19g01783 19 47097601 47103606 Gma03g01733 03 43439341 43445898 GST