Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01689 ATGGCAACTTGCGAGGCAAATATGACGAAATTGGCTGTTAAGAGTTCCTACTGGCTCTGTTTTCTTCTCGTTTTTGGTTTGTCATTGTCCATCTTCTTCTTCTCTTCCTCTTCGCACAAAGCAGCAAGCATCCTTGAGATGGAAACTTTCCTCTTCACCTCAGAATCTGTAAACGAAGGCCATCCCGACAAGCTGTGTGACCAGGTTTCAGATGCCATCCTAGATGCATGCTTGGAGCAAGACCCAGAAAGCAAGGTTGCTTGCGAGACCTGTACAAAAACTAACATGGTTATGGTCTTTGGTGAGATTACAACCAAGGCCAGCGTGAACTACGAGAAAATAGTTCGAGACACTTGCAAAGGCATTGGGTTTGTGTCACCAGATGTTGGTCTTGATGCTGACAACTGCAAAGTTCTGGTCAACATTGAGCAACAGAGCCCTGATATTGCTCAAGGAGTTCACGGTCATATGACCAAGAAACCTGAGGAAATTGGTGCTGGTGACCAAGGCCACATGTTTGGTTATGCTACAGACGAAACACCTGAGTTAATGCCACTCACTCATGTGCTTGCTACTAAACTTGGTGCCAGGCTCACTGAGGTGAGAAAGAACAAAACATGCCCCTGGCTGAGGCCAGATGGTAAAACCCAAGTGACAGTTGAGTACAAGAACGATGGTGGAGCCATGATTCCTATTCGGGTTCACACAGTTCTCATCTCAACTCAGCATGATGAAACTGTCACAAATGaacaaatctctaaagaattgaaagagcatgtgatcaaacctgtcatcccagctaaataccttgatgataagaccatcttccacctcaacccctctggtaggtttgtgattggtggaccccatggagatgcaggactcactggaaggaagatcattatcgacacctatggtggttggggtgctcatggtggtggtgccttctccggcaaggacccaaccaaggttgataggagtggtgcatacattgttaggcaagcagccaagagcgtggtagcttcagggcttgcacgacgttgcattgtgcaggtttcttatgcaattggagttccagagccactttctgtgtttgtagacacataccaaacggggaagattccagacaaggacatattggctctaattaaggagaaatttgatttcaggccaggaatgatagcaatccatcttgatctcatgagaggaggcaacttcaggtaccagaaaactgctgcttatgggcattttggacgtgacgatcctgatttcacttgggagaccgtgaagatcctcaagCCTAACGCTTGA 1311 0.267 MATCEANMTKLAVKSSYWLCFLLVFGLSLSIFFFSSSSHKAASILEMETFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKASVNYEKIVRDTCKGIGFVSPDVGLDADNCKVLVNIEQQSPDIAQGVHGHMTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAMIPIRVHTVLISTQHDETVTNEQISKELKEHVIKPVIPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYQTGKIPDKDILALIKEKFDFRPGMIAIHLDLMRGGNFRYQKTAAYGHFGRDDPDFTWETVKILKPNA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01689 436 Pfam S-adenosylmethionine synthetase, central domain 163 284 IPR022629 GO:0004478|GO:0006556
Gma03g01689 436 PIRSF MAT 44 435 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma03g01689 436 Pfam S-adenosylmethionine synthetase, C-terminal domain 286 427 IPR022630 GO:0004478|GO:0006556
Gma03g01689 436 Pfam S-adenosylmethionine synthetase, N-terminal domain 50 147 IPR022628 GO:0004478|GO:0006556
Gma03g01689 436 ProSitePatterns S-adenosylmethionine synthase signature 1. 165 175 IPR022631 GO:0004478|GO:0006556
Gma03g01689 436 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 47 436 - -
Gma03g01689 436 SUPERFAMILY S-adenosylmethionine synthetase 286 432 IPR022636 GO:0004478|GO:0006556
Gma03g01689 436 Gene3D - 50 288 - -
Gma03g01689 436 Gene3D - 57 325 - -
Gma03g01689 436 Hamap S-adenosylmethionine synthase [metK]. 48 436 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma03g01689 436 TIGRFAM metK: methionine adenosyltransferase 51 432 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma03g01689 436 CDD S-AdoMet_synt 51 430 - -
Gma03g01689 436 SUPERFAMILY S-adenosylmethionine synthetase 49 155 IPR022636 GO:0004478|GO:0006556
Gma03g01689 436 Gene3D - 163 427 - -
Gma03g01689 436 ProSitePatterns S-adenosylmethionine synthase signature 2. 312 320 IPR022631 GO:0004478|GO:0006556
Gma03g01689 436 SUPERFAMILY S-adenosylmethionine synthetase 161 285 IPR022636 GO:0004478|GO:0006556
Gma03g01689 436 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 47 436 IPR002133 GO:0004478|GO:0005524|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01689 Gma-Chr3 43080467 43084244 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01689 K00789 - gmx:100794248 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01689 03 43080467 43084244 Gma03g01689 03 43080467 43084244 ECH
Gma03g01689 03 43080467 43084244 Gma10g00499 10 5005530 5006702 PCT