Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01685 ATGCCTGCAACGCCATTCTCGTGTTCGTTCCTCACTCTTCAACCGCGCTTCAACTCCTACGTTAACCCCATCTTCCGTTCACTCACCTTCCAACTCTCTTCTTCGCCGCTCCCATTCAATGCCAACTTCTCCAGCGTCAGACTCCACTCTTCGCTCTCGCGAGCGGCGGAGACCGATTCTCCGACCGGCGGAAGGTCCGGCGCGCTAACTCCCGGTCCCGCCGTCGCCGGTGAAGTTCAAAAGATCGACGTGAATCCTCCCAAGGGGACGCGCGACTTCCCGCCCGAGGACATGCGCTTGCGCAACTGGCTCTTCAATCATTTCAAAGAGGTTTCGCGGTTGTATGGATTTGAAGAGGTTGATTACCCGGTGCTTGAGTCGGAGGCATTGTTCACTAGGAAAGCAGGAGAAGAAATTAAGGATCAGCTTTATTGTTTTGAAGATCGAGGCAATCGCCGTGTTGCATTGAGGCCTGAACTTACTCCTTCTTTGGCAAGGCTGGTGATCCAGAAAGGGAAGTCCGTGTCATTACCAATAAAGTGGTTCACTGTTGGACAATGTTGGCGGTACGAGAGAATGACAAGGGGGCGTCGTCGTGAGCACTACCAATGGAACATGGATATTATTGGTGTTCCCGGGGTTATGGCTGAAGCAGAGCTTATAGCTTCTATCGTCACTTTGTTTAAGCGAATAGGAATTACAGAATCAGATGTCGGATTTAAGGTTTCCAGTCGAAAGGTTCTGCAAGAAGTATTAAATTGTTATTCAGTACCAGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAATTGAGAAAATTCCAGCTGACGAGATAAAGAAAGAGTTGAAAGCTGTTGGTCTATCTCAAGAGGCTGTCCAGGAGCTATTGCAAGTCCTTTCTGTGAAGTCATTGACCGAGTTAGAAGAGAGACTTGGGAGCAGTGGGGAAGCAGTTGCTGATCTGAAACAGCTATTCTCCCTTGCTGAAAAAATTGGTTACTCTAAATGGCTTCAATTTGATGCATCAGTTGTTCGAGGTCTTGCTTACTACACTGGCATTGTATTTGAGTTGCTCAAAGAGAAGGGTCTGTTACCGGAGCTTAACTTGCAAATAGATGACATTGTGTGTGCCTTGGACGAAGATCTTCAAGGATGTGCTGCTATGGTCGCTAACATTCTCAGAGAAAAAGGGCAGATTGTTGAGTTGGTTTTGGAAAGCAAACCACTTAAATGGGTTTTTAAACGTGCAGCCCGATTAAATGCTGAGCGGCTTGTGTTAGTGGGGAATTCTGAATGGCAAAGGGGTGTGGTTGGTGTCAAAATTCTCTCTACTGCTGAACAGTATGAGGTTAAACTGGATGATCTGAAGTAA 1377 0.4677 MPATPFSCSFLTLQPRFNSYVNPIFRSLTFQLSSSPLPFNANFSSVRLHSSLSRAAETDSPTGGRSGALTPGPAVAGEVQKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYGFEEVDYPVLESEALFTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPIKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELIASIVTLFKRIGITESDVGFKVSSRKVLQEVLNCYSVPENLFGKVCVIIDKIEKIPADEIKKELKAVGLSQEAVQELLQVLSVKSLTELEERLGSSGEAVADLKQLFSLAEKIGYSKWLQFDASVVRGLAYYTGIVFELLKEKGLLPELNLQIDDIVCALDEDLQGCAAMVANILREKGQIVELVLESKPLKWVFKRAARLNAERLVLVGNSEWQRGVVGVKILSTAEQYEVKLDDLK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01685 458 Gene3D - 375 458 IPR036621 -
Gma03g01685 458 SUPERFAMILY Class II aaRS and biotin synthetases 86 363 IPR045864 -
Gma03g01685 458 Gene3D Bira Bifunctional Protein; Domain 2 80 374 IPR045864 -
Gma03g01685 458 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 358 458 - -
Gma03g01685 458 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 80 359 - -
Gma03g01685 458 SUPERFAMILY Class II aaRS ABD-related 373 457 - -
Gma03g01685 458 PIRSF His-tRNA_synth 358 458 IPR004516 GO:0005737
Gma03g01685 458 PIRSF His-tRNA_synth 80 365 IPR004516 GO:0005737
Gma03g01685 458 CDD HisRS-like_core 97 364 IPR041715 -
Gma03g01685 458 Pfam Histidyl-tRNA synthetase 89 362 IPR041715 -
Gma03g01685 458 MobiDBLite consensus disorder prediction 54 93 - -
Gma03g01685 458 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 89 342 IPR006195 -
Gma03g01685 458 PANTHER HISTIDYL-TRNA SYNTHETASE 358 458 IPR004516 GO:0005737
Gma03g01685 458 PANTHER HISTIDYL-TRNA SYNTHETASE 80 359 IPR004516 GO:0005737
Gma03g01685 458 Pfam Anticodon binding domain 377 457 IPR004154 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01685 K01892 - gmx:100793186 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01685 03 43013489 43026633 Gma03g01685 03 43013489 43026633 ECH