Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01680 ATGGCTTTATATGAGCATTCAGATGTTTTTCAGTGGGGTCTCAATCTTCTTGACGGTGACCCTGCTTATAGTCCTGGATACAATAGCAACATAATTCAAAAGGATGATAATGAATGTAACAATGAAGAGACTGATGGGATGATTACCCGTAAACTTCAAGAAGAGTTTTCACAGCTAGAGATTGCCGAATATTCAGGATATTTACAGGGAGGTGAACAACAGTTCCATGTTCCTGATACTCAGCCTGCATATGATTGGAATAGCTCTTCAATGGTGAACTATTGTTCAGAAGGTTATGATTATGCCCAAGAAGGAATTGGTAATGGAGAACCCTCTAGTTCATGTTCTCGTCCTTGTGAAACAGAGGAATATTCGTTAGAGCTAACTGACAATTACCCACTTGATGATGAAGTAGGAAGGAGATTGAGTCAAATGATACCAATTCATCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGATGAAGAAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATACGACTTCGTGGAGCACAAAGTACAAGGTGATGGGAATTGTCAGTTCCGTGCACTATCTGATCAATTGTATCATGCACCTGATCACCACGTGTTTGTGAGACGACAAGTTGTCAATAAGCTTAAATCTAACCCAGAGATTTATGATGGATATGTTCCCATGGAATATGATGACTATTTGATCAAGATGTCTAAGAGTGGCGAATGGGGTGATCATGTCACTCTCCAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATAACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAGAAGTGATTTTTCTGAGTTTCTGGGCAGAGGTGCATTACAACTCCATTTATCCCCAAGGAGATATACCATCAAGTGGATCTAGAAAGAAGAAAAGGTGGTGGAGTTTTGGCAGTAAGCATTAG 978 0.3947 MALYEHSDVFQWGLNLLDGDPAYSPGYNSNIIQKDDNECNNEETDGMITRKLQEEFSQLEIAEYSGYLQGGEQQFHVPDTQPAYDWNSSSMVNYCSEGYDYAQEGIGNGEPSSSCSRPCETEEYSLELTDNYPLDDEVGRRLSQMIPIHHVPKINGEIPSIDEETSDHQRLLDRLQLYDFVEHKVQGDGNCQFRALSDQLYHAPDHHVFVRRQVVNKLKSNPEIYDGYVPMEYDDYLIKMSKSGEWGDHVTLQAAADSYGVRIFVITSFKDTCCIEILPHFEKPKEVIFLSFWAEVHYNSIYPQGDIPSSGSRKKKRWWSFGSKH 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01680 325 PANTHER OTU DOMAIN CONTAINING PROTEIN 32 321 - -
Gma03g01680 325 SUPERFAMILY Cysteine proteinases 166 304 IPR038765 -
Gma03g01680 325 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 32 321 - -
Gma03g01680 325 Pfam OTU-like cysteine protease 186 272 IPR003323 -
Gma03g01680 325 ProSiteProfiles OTU domain profile. 180 304 IPR003323 -
Gma03g01680 325 Gene3D - 160 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01680 Gma-Chr3 42919703 42925654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01680 - - gmx:100791075 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00522 10 5314288 5320950 Gma03g01680 03 42919703 42925654 ECH
Gma03g01680 03 42919703 42925654 Gma03g01680 03 42919703 42925654 ECH
Gma03g01680 03 42919703 42925654 Gma10g00522 10 5314288 5320950 PCT
Gma03g01680 03 42919703 42925654 Gma13g01234 13 26615722 26623019 PCT