Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01671 ATGGTATCGAAGAGTAAAATGGAAGCAGGGACATTGAGTCCTAACCACCCTCCTTGCTTTCTTCGTCAGTCACTTCCTGCTGTTGCACCTATGCTTCTGATTTCAACAGGATATGTTGACCCTGGAAAGTGGGTAGCCACTGTTGAAGGTGGTGCACGGTTTGGGTTTGATCTGATGGCTGTCATGCTTATTTTCAATTTTGCTGCTATCTTCTGTCAGTACATATCTGCAAGGATTGGTGCGATTACTGGAAAAAGTCTAGCTCAGATTTGCAGTGATGAGTATGATACATGGACATGCATGCTCCTTGGAGTTCAAACAGAACTTTCAGTGATAATGCTAGACCTTAACATGATCTTGGGCATGGCACAAGGATTAAATCTTATTTTTGGGTGGGACTTGTTCACTTGTGTCTTTTTAACTGCTACTGGTGCTGTTTTTCATATACTTCTCTCAGTTCTCCTTGACATTGAGAAGGCAAAAATCCTAGGACCGTTTGTTGCTGGTTTTGTATTGCTTGCTTTTATACTTGGACTGCTTATCAATCAACCGGAAATTCCATTTTCCATGAATGGAATACCAACAAGGTTGAGTGGGGAGAGTGCATTTGTGCTAATGAGTCTTCTAGGAGCAAATCTTGTACCTCACAACTTTTACCTTCATTCCTCTATTGTACAGTGGCATCAGGGATTGACAAGCATTTCTAAGAATGCTTTGTGTCATAACCACTTTTTGGCCATATTATGTGTTTCCAGTGGTCTTTATTTGGTAAATAATATGCTGATGACCGCCTCAGCAAATGAGTTCTACAGTACAGATCCTGTTCTGCTTACTTTTCAGGATGCATTGTCACCCATGGAACAGGTCTTACGTAGCCCAATAGCTCTGCTTGGGTTTTTGCTCATTTTGTTTCTTGCAAATCAAACCACAGCATTAACTTGGAGTTTAGGCGGAGAAGTAGTAGTGCGTAATTTCTTAAAATTGGATATTCCAGGTTGGCTTCATTATGCTACAATTAGAGTGATTGCTGTTTTGCCTGCCCTTTATTGTGTCTGGAGTTCAGGAGCTGAGGGGATGTATCAGCTACTATTATCCACACAAGTTTTGGTAGCTCTGCAACTTCCATCTTTTGTGATCCCTCTTTTTCGAGTTGCCACATCTAGATCAATAATGGGTGTACACAAGATATCCCAGTTTCTGGAACTTTTGGCATCGATCATATTCATTGGTATGCTTGGCTTGAATATTGTCTTCGTGGTAGAAATGATATTCGGCAATAGTGACTGGGCAAGTGATTTGAGATGGAATGTTGGGAGTGGTGTGTCTGTCTCATATTTAGTTCTTCTTACCGCTGCTATTACATCGTTATGTTTGATGCTTTGGTTAGCCGCCACACCTTTAAGATCTGCCAGTGTCCAATTAGATGCTCAGACATGGAACTGGGATATGCCAGAGACTCTGCCAACTCCTCCAGTTGTTGGGGAGGAATTGTATTTAACTGAAAAAAAGTGTCATGAAGATGTATCTAAGCATGTGGAGGAACACACACCAGCTGTAGCAAAAAGCTTGGACTACTCAGATGTATCACTTCCAAGTTTTCATCCTGATCTACCTGAATCTTTAATGGAACCTGAACCCCATGTGAATGCTGTAAGGGATAATTATTCTCTTATATCGACTTCCACATCAGAGTTAGAGGCAGTATATGCTGTAGTTAATGAGACTTCTGATTCTTGTTTGGAAGACACCAAAACCATAACAATGGAAACAAACGCTGAAAGGGATGACGATGATTCATGGGAAACTGAAGAACCTTCTGGAGTGGTATCAGCCAGTGTTCCATCTTCAACATCAGATGGCCCTGCATCATTCAGGAGTCTTAATGGCAAAAGTGATGAAGGAGGGAATAGCTGTGGAAGTCTTTCAAGAATAGAAGGCTTAGGGCGTGCAGCAAGGCGTCAGCTAGCTACTGTTCTTAATGAATTCTGGGGACAACTATATGATTTGCATGGACAAGTAACCCAGGAGGCAAAGGCTGGGAAAATTGACCTTTTGCTGGGAGTGGGTGTAGATTCAAGGCCCACCAGTTCCTTGCAAAAAGTGGATGCATGTGGAAAGGATTATTCTGAATACTTAGTATCTGTCAGAGGTAGAGCTTCTGACGCATTAATGAACTCTGCTTCATATGATTCTTCCAAGCAGCCTATGATGCAAAGTAATTCAGAGTCTTATGGCCTTCAAAGGAGTTCTTCCTCAATGTGGGCAAATCCCATCCAATTATTGGATGCATATGTACAGAACTCTAGCCACAATCTCCTCGATTCTGGTGAGAGGCGCTATTCAAGTGTGCGTAATCTACATTCATCAGAAGCTTGGGATTATCAACCAGCTACCATACATGGTTATCAGACTGCATCCTATCTTAGCCGGCTTGGTAAAGACAGAAATTCTGCTAACTTAAATTGTCAGGTGGACTTGTCATCACTGAAATCCCCTTCCATAGTTAATACAAAGTACAGGGATTCACTTGCATTTGCTTTGGGGAAAAGGTTGCAAAGTGGCTCAGGTGTGGGCCAACCCCCAGGGTTCCCAAATGTAGCTGTCTCTAGAGATTCCCAATTACAATCTGAGAGGTTTTATTATGACTTATGCTCTTCTGGATCTGCAGATAATACAGTCAATTCAGTTAATACTAAAAAGTACCACAGTTTGCCAGACATTTCAGGATACTCCATCCCCCACAGGGCTGGTTATGTGTCTGATAAAAATGCTCCAAGGGATGGTTCTGTTGGATATGGATCTTTTGCTAGTAGGACGTGCTATGACCAATCATTATATTTAAATTCTGGATCAAGAACAGGAGGTCATTTGGCCTTCAATGAACTTCCTTTGTCTGAAGTTTACAACAAGGCACTCTCTTCACAGTTGAGTTCTGGTTTTGATACTGGATCCCTCCGGTCTAGATTGCCTTATGAGCAGTTTGGGGTAGCTGAGAAAATTCCTAATGTTGCAATGGAAGCTGTTGGAAATAGGCCTAATGCAATTGCTCAAGAAACTACTTCATTTGTGGATATAGAGGGGAAACTTCTTCAGTCTATTAGACTTTGCATTGTGAAGCTCTTGAAACTGGATGGGTCTGATTGGTTGTTTAGACAGAATGGTGGAGCCGATGAGGATCTGATAGATTCTGTTGCTGCAAGGGAGAAGTTGTTTTATGAAATTGAAACCAGGGAGATGAATCAGGTCATTCATATGGATGAAGCTCATTATTTTCCTTCTGATAGGAAATTTGGTTCTTCAATGAAGAGTAATGGGGCATATTCTTCAGGTTTTTCGGTGTCTTCGGTTCCAAATTGCGGGCAGGGATGTATATGGAAAACAGATTTAATAATAAGCTTTGGAGTATGGTGTATCCACAGTATTCTTAACCTCTCAATTGTAGAAAGCCGGCCGGAGCTTTGGGGGAAATACACCTATGTTCTCAATCGCCTCCAGGGCATCATTGATCCAGCTTTCCTTAAGCCTCGGAGTCCCTTGGCTCCATGCTTCTGCCTTCAAGTTCAGCAAAAGTTAAGCCCCCATCTTTCAAATGGGATACTACCCCCAACGACTACAAAACCAGGCCAGGGCAAATGCACAACTGCATCAACGTTGCTTGAACTTATCAAGGAAGTGGAGCTTGCCATCTCTGGCAGGAAAGGACGTACCGGAACTGCCGCAGGCGATGTGGCTTTCCCTATGGGGAAGGAAAATTTGGCGTCTGTTCTCAAACGGTACAAGCGGAGGCTATCTAACAAGCCCGTTGGCACTAATGGAGGGACAGGTTCACGCAAGATCCCCACATTAGCACCATACAACCAATAA 3864 0.4257 MVSKSKMEAGTLSPNHPPCFLRQSLPAVAPMLLISTGYVDPGKWVATVEGGARFGFDLMAVMLIFNFAAIFCQYISARIGAITGKSLAQICSDEYDTWTCMLLGVQTELSVIMLDLNMILGMAQGLNLIFGWDLFTCVFLTATGAVFHILLSVLLDIEKAKILGPFVAGFVLLAFILGLLINQPEIPFSMNGIPTRLSGESAFVLMSLLGANLVPHNFYLHSSIVQWHQGLTSISKNALCHNHFLAILCVSSGLYLVNNMLMTASANEFYSTDPVLLTFQDALSPMEQVLRSPIALLGFLLILFLANQTTALTWSLGGEVVVRNFLKLDIPGWLHYATIRVIAVLPALYCVWSSGAEGMYQLLLSTQVLVALQLPSFVIPLFRVATSRSIMGVHKISQFLELLASIIFIGMLGLNIVFVVEMIFGNSDWASDLRWNVGSGVSVSYLVLLTAAITSLCLMLWLAATPLRSASVQLDAQTWNWDMPETLPTPPVVGEELYLTEKKCHEDVSKHVEEHTPAVAKSLDYSDVSLPSFHPDLPESLMEPEPHVNAVRDNYSLISTSTSELEAVYAVVNETSDSCLEDTKTITMETNAERDDDDSWETEEPSGVVSASVPSSTSDGPASFRSLNGKSDEGGNSCGSLSRIEGLGRAARRQLATVLNEFWGQLYDLHGQVTQEAKAGKIDLLLGVGVDSRPTSSLQKVDACGKDYSEYLVSVRGRASDALMNSASYDSSKQPMMQSNSESYGLQRSSSSMWANPIQLLDAYVQNSSHNLLDSGERRYSSVRNLHSSEAWDYQPATIHGYQTASYLSRLGKDRNSANLNCQVDLSSLKSPSIVNTKYRDSLAFALGKRLQSGSGVGQPPGFPNVAVSRDSQLQSERFYYDLCSSGSADNTVNSVNTKKYHSLPDISGYSIPHRAGYVSDKNAPRDGSVGYGSFASRTCYDQSLYLNSGSRTGGHLAFNELPLSEVYNKALSSQLSSGFDTGSLRSRLPYEQFGVAEKIPNVAMEAVGNRPNAIAQETTSFVDIEGKLLQSIRLCIVKLLKLDGSDWLFRQNGGADEDLIDSVAAREKLFYEIETREMNQVIHMDEAHYFPSDRKFGSSMKSNGAYSSGFSVSSVPNCGQGCIWKTDLIISFGVWCIHSILNLSIVESRPELWGKYTYVLNRLQGIIDPAFLKPRSPLAPCFCLQVQQKLSPHLSNGILPPTTTKPGQGKCTTASTLLELIKEVELAISGRKGRTGTAAGDVAFPMGKENLASVLKRYKRRLSNKPVGTNGGTGSRKIPTLAPYNQ 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01671 1287 MobiDBLite consensus disorder prediction 1267 1287 - -
Gma03g01671 1287 MobiDBLite consensus disorder prediction 582 638 - -
Gma03g01671 1287 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 21 1173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma03g01671 1287 MobiDBLite consensus disorder prediction 1263 1287 - -
Gma03g01671 1287 MobiDBLite consensus disorder prediction 605 638 - -
Gma03g01671 1287 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 21 1173 - -
Gma03g01671 1287 PIRSF EIN2 7 1284 IPR017187 GO:0009873
Gma03g01671 1287 Pfam Natural resistance-associated macrophage protein 44 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma03g01671 1287 PRINTS Natural resistance-associated macrophage protein signature 103 129 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma03g01671 1287 PRINTS Natural resistance-associated macrophage protein signature 205 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma03g01671 1287 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma03g01671 1287 PRINTS Natural resistance-associated macrophage protein signature 335 352 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma03g01671 1287 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01671 Gma-Chr3 42815515 42821447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01671 7 1278 Miscellaneous Gene Families AT5G03280 50.643 0.0 1171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01671 - K14513 gmx:100813034 2531.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01671 03 42815515 42821447 Gma03g01671 03 42815515 42821447 ECH
Gma19g01719 19 46504488 46505316 Gma03g01671 03 42815515 42821447 GST
Gma03g01671 03 42815515 42821447 Gma10g00530 10 5445901 5454664 PCT
Gma03g01671 03 42815515 42821447 Gma13g01242 13 26724217 26733157 PCT