Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01649 ATGGCTTCTTCTCGGCTCGATTTCTTGTTCTGTAATTTGTGTGGGACAATGCTCACTGTCCCTTCCACTGAGTACGCACAATGCCCACTGTGCAAAACTCGCCGAGACATACAAGATATTTGTGATAAGGAAATAAGTTTCACAATTTCTGATGAGGATATCAGAAGAGAGCTTGGAATGGAAATAATTGAGGAACATGCGGTGATGGAATATTCTAAGgtcagcaagaaatgtgaaaaatgtggccatggtgaagctacctattatactagacagatgagatcagcagatgaagggcaaactactttctacacatgtaccggctgtggtcatcaatctcaggagaattag 351 0.2593 MASSRLDFLFCNLCGTMLTVPSTEYAQCPLCKTRRDIQDICDKEISFTISDEDIRRELGMEIIEEHAVMEYSKVSKKCEKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01649 116 Pfam Transcription factor S-II (TFIIS) 77 112 IPR001222 GO:0003676|GO:0006351|GO:0008270
Gma03g01649 116 SUPERFAMILY Zinc beta-ribbon 58 115 - -
Gma03g01649 116 PIRSF RNApol_RpoM 8 116 IPR012164 GO:0006351
Gma03g01649 116 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT 5 115 - -
Gma03g01649 116 CDD Zn-ribbon_RPA12 70 116 IPR034004 GO:0006379
Gma03g01649 116 PANTHER DNA-DIRECTED RNA POLYMERASE 5 115 IPR012164 GO:0006351
Gma03g01649 116 SMART Cys4_2 76 115 IPR001222 GO:0003676|GO:0006351|GO:0008270
Gma03g01649 116 ProSiteProfiles Zinc finger TFIIS-type profile. 74 114 IPR001222 GO:0003676|GO:0006351|GO:0008270
Gma03g01649 116 Gene3D - 63 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01649 Gma-Chr3 42604235 42606126 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01649 K03000 - gmx:100527489 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01697 19 46261091 46262692 Gma03g01649 03 42604235 42606126 GST