Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01632 ATGGGTGATGCTGGAATTAAACCTGGTGTTATTGCATATACAACAGCCATGAAGGTTTGTGTTGAAAGTAAGAATTTTATGCAAGCATTAACATTATATGAAGAAATGAAATGCTACGAGATACGTCCAAATTGGGTGACATATAACACACTTCTGAAGGCACGCAGTAAATACGGCTCCCTACACGAGGTGCAACAATGCCTGGCTATATACCAGGATATGCGAAAGGCAGGGTACAAACCCAATGACTACTATCTGGAAGAACTGATTGAGGAGTGGTGTGAAGGAGTGATACAAGATAACAGAGAGAAGCAAGGAGAATTTTCTTCCAGCAATAAATCTGAATCAGAGAGACCCCATAGTTTACTTCTTGAAAAAATTGCAGCCCACCTGCTAAAGAGGGTGGCTGACATCCTAGCAGGACATTCAGTAAATGATGATATCTTGATCATCATAGGAGCTACTAAAGTAGATGAAAATCCATCCAAACACATATTAGAAGTGCAAGAGGCAATAATAAAACTTCTTAGGAATGAGTTGGAGCTTGAAGTTTTTCCAGCCAGAACCAGACTAGCACTATGTGACACAGCAAAGTTAGAGTACCCCAACCGTTCAAATCTCAACATCGAAGCACTACCAGGAGAGAATGCATTGGGGTTTCAGACAAGGAGACCCGGAGTTCTAGTAAGGTTGAAGGTCACAAAAAAATCATTGTACAGTTGGTTGCACAGGAAGTAA 738 0.4092 MGDAGIKPGVIAYTTAMKVCVESKNFMQALTLYEEMKCYEIRPNWVTYNTLLKARSKYGSLHEVQQCLAIYQDMRKAGYKPNDYYLEELIEEWCEGVIQDNREKQGEFSSSNKSESERPHSLLLEKIAAHLLKRVADILAGHSVNDDILIIIGATKVDENPSKHILEVQEAIIKLLRNELELEVFPARTRLALCDTAKLEYPNRSNLNIEALPGENALGFQTRRPGVLVRLKVTKKSLYSWLHRK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01632 245 Pfam PPR repeat family 8 54 IPR002885 -
Gma03g01632 245 TIGRFAM PPR: pentatricopeptide repeat domain 46 82 IPR002885 -
Gma03g01632 245 TIGRFAM PPR: pentatricopeptide repeat domain 12 45 IPR002885 -
Gma03g01632 245 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 9 43 IPR002885 -
Gma03g01632 245 Gene3D Tetratricopeptide repeat domain 1 117 IPR011990 GO:0005515
Gma03g01632 245 PANTHER OS03G0284900 PROTEIN 139 235 - -
Gma03g01632 245 PANTHER OS03G0284900 PROTEIN 1 140 - -
Gma03g01632 245 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 44 81 IPR002885 -
Gma03g01632 245 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 139 235 - -
Gma03g01632 245 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01632 Gma-Chr3 42456643 42459177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01632 1 113 Glycosyltransferase AT1G05670 25.664 5.90e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01632 - - gmx:100805564 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01679 19 46098580 46106213 Gma03g01632 03 42456643 42459177 GST