Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01566 ATGGCGGAGGCTCCTCCGTCTCTATTATCTGTGTGCATCGACGCTCTCACACAACAACTTCTCCGTCCATGCGATGATGATCTTCTTCCTTGTATCTACGATCTTCCTTCTCACTTACTCGACACCTTAATCACGCGTTTGCCCCCTTTCGCACTCCGCACATTCCACCACCACCTGCCATTCGACGAGGAAGGGTTTTCTCACGACGACTCAACCAAAAAGCGAAAACGCGCAAGGGATTGGAATTTAAATTCAGCTTGGCAGAGGTTGTTTCAGCTACGCTGGCCTGATCGCGTTAAGCAGATTCATAGAACGGATTGGGAGCAACTCTATTGGGAAACTCATTTGCAAGATTGTTTAGATGAAGCAGTGGAGGTAGCACTAATTCCATCTTTTACTGGATATATTGGTGACATACAGATTTCAGATAGCATACTGAAATATATTGGCTTTGTGGGGAATACAAACCATTCTACTTGTGACCATTCAAAATTGTCTTACCATTGCCTACAATTTGGCAGCCATGTGAGTTGCCTGGGGCTGCAAAATGTTCTATGTACTGCAGAAACTAGTGTTTTGTTGAGGGAATGCAAGCTACAGAGTCTGGTACTTAGATGTATCAGATCCAAGGAACAAATTGATGGATTATGCAAACTTCTTGCTCAACATTGTAGAACGTTAACGTCTCTGGAATTTGTTCACTGTGCACTCTCAACAGATTTTATTAATGCAATATTTGGCTCTTTAGTCATAGAGAGAGTACAAAAACATGGGATCCAACATTTGTCAATCATTGCCACAAGTTTTCTGGAACCATGTACAGTTTCTTTACCTAGTGGACTCGTGTCATTTTTGTCTTCGGGAAGGTCCTTGTGCTCATTAAAATTATCTGAGAACCACCATGGATGGACTTTTGCCAAAGATCTTTTTGTGACTCTTCTCAATCTTTCATCTGGCATATCTGTCCTTGACCTTTCTCGGAATAGAATATCAGGATGGCTTTTTTACTACAGGAGATCCTTGAGTGGTTCACATCTGTCGTTTGGAAATGGAAAGTCCTTGAAACTGTTGCGTGTACTCAATCTGAGGGAAAACAATTTAGGAAAAGATGATGTACAACATCTTAGATATGCTCTTGAACATGTGCCTAACTTGGAGGAGCTGGATATAAGTGACAATTCAATTGAAGATGAAGGAATCAGGAATTTAATTCCCTATTTTGTTGGAGCATCTGAAACCTGTCCTCGCATAACTTGTTTGAAATTAGAGAACTGTGATCTGTCCTGTGTTGGAGTGAATCTTCTCCTACATTACCTTTCTACTTTCAAAGGACCATTAAAGTCTCTTTCTATTGCTGAGAATTACCTTGGCAGACAAGTAGTTGAAGCATTGGGAAATTTTTTTCACACCCCAATCGAAGTACTTGACATTGCAGGCATTGGATTGGGTTCTGACGGTTTTCAAGAGCTTCAAAGTCTAATAAAAGAGGAGATTAAGCTGGTGAAAATTAATATAAGGCTCCACAACTAG 1530 0.4092 MAEAPPSLLSVCIDALTQQLLRPCDDDLLPCIYDLPSHLLDTLITRLPPFALRTFHHHLPFDEEGFSHDDSTKKRKRARDWNLNSAWQRLFQLRWPDRVKQIHRTDWEQLYWETHLQDCLDEAVEVALIPSFTGYIGDIQISDSILKYIGFVGNTNHSTCDHSKLSYHCLQFGSHVSCLGLQNVLCTAETSVLLRECKLQSLVLRCIRSKEQIDGLCKLLAQHCRTLTSLEFVHCALSTDFINAIFGSLVIERVQKHGIQHLSIIATSFLEPCTVSLPSGLVSFLSSGRSLCSLKLSENHHGWTFAKDLFVTLLNLSSGISVLDLSRNRISGWLFYYRRSLSGSHLSFGNGKSLKLLRVLNLRENNLGKDDVQHLRYALEHVPNLEELDISDNSIEDEGIRNLIPYFVGASETCPRITCLKLENCDLSCVGVNLLLHYLSTFKGPLKSLSIAENYLGRQVVEALGNFFHTPIEVLDIAGIGLGSDGFQELQSLIKEEIKLVKINIRLHN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01566 509 ProSiteProfiles Leucine-rich repeat profile. 384 404 IPR001611 GO:0005515
Gma03g01566 509 SMART LRR_RI_2 354 381 - -
Gma03g01566 509 SMART LRR_RI_2 469 496 - -
Gma03g01566 509 SMART LRR_RI_2 414 441 - -
Gma03g01566 509 SMART LRR_RI_2 382 409 - -
Gma03g01566 509 Gene3D Ribonuclease Inhibitor 153 343 IPR032675 -
Gma03g01566 509 Pfam Leucine Rich repeat 383 402 IPR001611 GO:0005515
Gma03g01566 509 Gene3D Ribonuclease Inhibitor 344 509 IPR032675 -
Gma03g01566 509 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 3 506 - -
Gma03g01566 509 SUPERFAMILY RNI-like 158 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01566 Gma-Chr3 41941159 41948219 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01566 - - gmx:100794405 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01566 03 41941159 41948219 Gma03g01566 03 41941159 41948219 ECH
Gma19g01619 19 45628540 45635688 Gma03g01566 03 41941159 41948219 GST