Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01553 ATGGACTCAAAAGAAGAGGCCGAACATCATGAGGATAGGCCAACATCGCCAATGCGGGTCCTGCAGCAGTTATCTGAAGGGGCATTCAGAGTTGCTGGGGAAGCATTTCACAATATGTATTCTGGTGGTGGGTCAAGTATGCCACAAATGGGGCCTGGTGCACATAGACGATGTCAAAGTGAACTTGTTACTAGAGAAGGAGTTCAGCGTAATAATAGCTTTCAGAAATTAAGATCTCATGTGCACAAGGCTTGGCGGTGGGGTGGCAGATTCCGCGAAGAAGTTTCACCGGCGAGTTTCAACCCTGAGGTCATGGCCAACCAGAAACGGCAGTGGTATCGGCTTCATCCTAAAAATCTGGATTGTGTAAATTATAAGGAGCCAGAATCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGCCGTGGAGCATGCATTTGCAAGAAGGAAAAAGTGGGAAAAGGAAAAACCTGCATCTCTAGATTACAAAATGTTACAGCAACAAAGGCCACCGGAACCAACTTTGGAACCTCAGTTACTGTTCAAATATCCTCCTGCAAAGAAGCTAACAATGAGTAAGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCATCTCTAAGCGAACTAAATGAACTTGTCTATGGACAGGAGCATTTAGGAAAAGATGATCTTTCATTTGTCTTTACAATCAAGGCAGCAGACAATGCAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGTATCTTAGGCATATCATCTCCTTTTTCTCATCCCTCTGGGGCATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGTTACTGTCTTCTAACTAAAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAAGAGCGCCTGAATCGGATAACTCAGTTTATAAATGAGGTGACTCTCACTGGCAGCACTCCATCAACACCCAAATTAGATGATCAAATGAGTTCAAATGCTAACTCCCCGGATAGGGAGTCATTCAGTGACTGGATGGATTGTGCAATACCCCTtgatgctgcagctgttattactgctgctgctgcggggattatatctgATGATGAAATCATACAGTTGTCCCCTAAAAGATGGGATTCTCGCTGTCAATCTCCTGTAAGTGTGACCGCCAGTGATGCTTCAGATCATTGGCAGGTCAGGGATATAGATAAGGATGGCAGGAAGAATCTACAAGATCATGATAATTGTACTTTTGGGGCACCAGAAACTCTTGGTTCTATAGAAAGAATGCATGGAAATTACAAAAATGACCAAGTTTCTCCGAAAGTTGGAACACCTTTTTCTGCTCAGAATCGTGTCTTGGAGCGTCTTGGAAGTTCCGAATCACTTTTCAGTCCAGTTAGAAGCATGGCATCAGAAGATGAGGACGATTTTTTCTCAAACAATGAAAGAGATTACGGGGACGAATTGTTAATAGAATGGGCCATGGAAAATAAGAATGATTTGCTACAGATAGTGTGTAGATATCATGCTGAACCTATTCCACCTCGAGGAAGTGAATTTGTCTTCCACCCTCTCGAACATCTACAGGCTATTCAGTACATACGACATTCAGTTGCTTCACTTGGCTTCGGGGATGATTGTTCAAATTGTTCTGAACCAGCTCTGGACAATGCAAAGCTGGCAGCTGCTGAGGAAGCCCTGTCATTATCAGTATGGACAATGGCAACTACTTGTCGAGTTCTGTCCCTTGATAGTGTGATGGCATTAATTACAGGAGTGTTGTTGGAAAAACAGGTGGTAATAATGTGTCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTGATTCCCATGATTCGTCCATTTCAGTGGCAGAGTTTATTGCTCCCGGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCTGATGACTTGAATATGAAAACTAAGAATCTTGTTCTTGTTAATATGCCAAAGGATCAGGTTACAATGTGTCACTTACCAAGACTTCCACGACATAGAGAGCTTCTCTCTCAGTTGACTCCAATTCATGCTAGACTTTCAAATGAAAGATCAATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCTGAAGCTTCAACTCAGTTTTTGAATATAATGTGGCACTATTTGGAGTCACTTTGTTCAGATCTGAAATCTCACACGATCACTAGTGTACAATCAAATAACGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCATTTCCTGCAAGGGACCAGCCATTCATTAAGCTATTTGTAGATACACAGCTCTTCACTGTTTTATCAGACTCTCGTTTGTCAAGCTTTGAGAGTGGTGAGTCATAG 2466 0.4165 MDSKEEAEHHEDRPTSPMRVLQQLSEGAFRVAGEAFHNMYSGGGSSMPQMGPGAHRRCQSELVTREGVQRNNSFQKLRSHVHKAWRWGGRFREEVSPASFNPEVMANQKRQWYRLHPKNLDCVNYKEPESLFEHFVIVGLHPDANLEAVEHAFARRKKWEKEKPASLDYKMLQQQRPPEPTLEPQLLFKYPPAKKLTMSKKDLAPFCFPEGVKAWLLERTPSLSELNELVYGQEHLGKDDLSFVFTIKAADNATLYGVCLHVPEIVQRPPGILGISSPFSHPSGACSRFLVSAPRCYCLLTKVPFFELHFEMLNSLIAQERLNRITQFINEVTLTGSTPSTPKLDDQMSSNANSPDRESFSDWMDCAIPLDAAAVITAAAAGIISDDEIIQLSPKRWDSRCQSPVSVTASDASDHWQVRDIDKDGRKNLQDHDNCTFGAPETLGSIERMHGNYKNDQVSPKVGTPFSAQNRVLERLGSSESLFSPVRSMASEDEDDFFSNNERDYGDELLIEWAMENKNDLLQIVCRYHAEPIPPRGSEFVFHPLEHLQAIQYIRHSVASLGFGDDCSNCSEPALDNAKLAAAEEALSLSVWTMATTCRVLSLDSVMALITGVLLEKQVVIMCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHKPDDLNMKTKNLVLVNMPKDQVTMCHLPRLPRHRELLSQLTPIHARLSNERSIARKHPVHRCNEVQAEASTQFLNIMWHYLESLCSDLKSHTITSVQSNNDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDSRLSSFESGES 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01553 821 ProSiteProfiles Tripartite DENN domain profile. 165 819 IPR037516 -
Gma03g01553 821 Pfam uDENN domain 184 262 IPR005113 -
Gma03g01553 821 SMART DENN_cls 292 693 IPR001194 -
Gma03g01553 821 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 25 818 - -
Gma03g01553 821 Pfam DENN (AEX-3) domain 592 691 IPR001194 -
Gma03g01553 821 SMART uDENN_cls 128 263 IPR005113 -
Gma03g01553 821 Gene3D - 590 756 IPR043153 -
Gma03g01553 821 MobiDBLite consensus disorder prediction 339 358 - -
Gma03g01553 821 Gene3D - 120 341 - -
Gma03g01553 821 PANTHER BNAA09G10210D PROTEIN 25 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01553 Gma-Chr3 41769870 41778660 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01553 - - gmx:100791254 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01609 19 45466422 45475097 Gma03g01553 03 41769870 41778660 GST