Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01547 ATGACAAAAAGTGTGTCAATGTCATACAGAAATTTAACTCTGGCCATTGACATCACAAAGCCAAGTTTGGGGTCAACAATCTCCTGGGTAGGAAACAACTGCACCACAAGGGGATTGGGGATAATTTCAATACGTCTAGTGTTTGCAAAAATGGAAGAAGAAAGTGCGTTGAGGCCGATGGACGCTGAGCAACTGAGAGAGCAGGCTCATAAGATGGTCGACTTCATTGCCGATTACTACAAAACCATCGAAGACTTCCCCGTTCTAAGCCAAGTTCAGCCAGGTTATCTTGGGAAGCTTTTACCAGATTCTGCACCTGATTCTCCTGAGTCATTGCAAAATGTTTTGGATGATGTGCAGGAAAAAATACTGCCAGGGGTGACGCACTGGCAAAGCCCAAATTATTTTGCGTATTTTCCTTCCAACAGTAGCATTGCTGGGTTTCTAGGAGAGATGCTCAGTGCGGGTCTTAACATCGTGGGTTTCAGCTGGATAACTTCTCCTGCTGCAACTGAACTTGAGACGATTGTTCTGGATTGGCTTGCAAAGGCTTTCCAGCTGCCTGATTATTTCTATTCTAGTGGGAAAGGTGGTGGAGTTATACAGGGAACTGCAAGTGAAGCTGTACTAGTTGTCTTATTAGCTGCCCGTGACAAGATCTTAAGGAGGGTTGGAAGGAATGCCCTTCCTAAGCTTGTGATGTATGCATCTGATCAAACACACTCTGCTTTACTAAAAGCTTGCCAGATAGCAGGAATTAATCCAGAGCTATGCAGGTTGCTTAAAACTGATTCTTCCACAAATTATGCACTTTCTCCTGATGTGCTTTCTGAAGCAATTTCAAATGACATTGCTGGCGGTCTTGTACCCTTTTTCTTATGTGCTACTGTTGGTACCACTTCATCAACAGCTGTTGATCCTCTGCCTGCATTGGGAAAAATTGCCAAGACCAACAAACTTTGGTTTCATGTGGATGCTGCTTATGCTGGAAGTGCTTGTGTATGTCCAGAGTACCGCCACTGCATTGATGGTGTTGAAGAAGCCGACTCATTTAACATGAATGCACATAAATGGTTCCTGACTAACTTTGACTGTTCATTACTTTGGGTTAAGGACAGAAGTTCTCTGATTCAATCATTGTCTACAAATCCTGAATTTCTGAAAAACAAGGCCTCTCAAGGAAACATGGTCATAGATTACAAAGATTGGCAAATTCCTCTTGGACGTCGCTTTAGATCATTAAAACTGTGGATGGTGTTGCGACTCTATGGATTGGATGGTCTGCGAAGTCACATAAGAAACCACATTGAGTTGGCTGCTAACTTTGAGGAGCTTGTACGTCAGGACACAAGATTCAAGGTTGTTGCACCTCGCACGTTCTCTTTAGTTTGTTTTCGGCTGCTGCCCCATCCCAATTCTGCAGATCATGGGAATAAGCTAAATAGTGATCTACTCGACTCAGTAAATTCAACTGGAAATGCTTTCATAACACACACGGTTCTATCAGGGGAGTACATTCTACGTTTTGCAGTAGGAGCACCATTGACAGAAAGGAGGCATGTCAATATGGCATGGCAAATTTTGCAAGATAAAGCCACTGCTCTACTTGAGAGTTTATAG 1620 0.4321 MTKSVSMSYRNLTLAIDITKPSLGSTISWVGNNCTTRGLGIISIRLVFAKMEEESALRPMDAEQLREQAHKMVDFIADYYKTIEDFPVLSQVQPGYLGKLLPDSAPDSPESLQNVLDDVQEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLNIVGFSWITSPAATELETIVLDWLAKAFQLPDYFYSSGKGGGVIQGTASEAVLVVLLAARDKILRRVGRNALPKLVMYASDQTHSALLKACQIAGINPELCRLLKTDSSTNYALSPDVLSEAISNDIAGGLVPFFLCATVGTTSSTAVDPLPALGKIAKTNKLWFHVDAAYAGSACVCPEYRHCIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRSSLIQSLSTNPEFLKNKASQGNMVIDYKDWQIPLGRRFRSLKLWMVLRLYGLDGLRSHIRNHIELAANFEELVRQDTRFKVVAPRTFSLVCFRLLPHPNSADHGNKLNSDLLDSVNSTGNAFITHTVLSGEYILRFAVGAPLTERRHVNMAWQILQDKATALLESL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01547 539 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 350 371 IPR021115 GO:0016831
Gma03g01547 539 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 60 538 - -
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 197 217 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 65 84 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 132 151 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 88 105 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 153 171 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 406 421 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 106 125 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 172 191 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 PRINTS Aromatic-L-amino-acid decarboxylase signature 449 468 IPR010977 GO:0006520|GO:0016831
Gma03g01547 539 CDD DOPA_deC_like 135 530 - -
Gma03g01547 539 Gene3D Aspartate Aminotransferase, domain 1 434 539 IPR015422 GO:0003824
Gma03g01547 539 Gene3D - 141 433 IPR015421 GO:0003824
Gma03g01547 539 Pfam Pyridoxal-dependent decarboxylase conserved domain 94 467 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma03g01547 539 PANTHER BNAA07G00240D PROTEIN 60 538 - -
Gma03g01547 539 Gene3D - 55 140 - -
Gma03g01547 539 SUPERFAMILY PLP-dependent transferases 60 532 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01547 Gma-Chr3 41695525 41703724 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01547 K01593 - gmx:100791074 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01547 03 41695525 41703724 Gma03g01547 03 41695525 41703724 ECH