Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01519 ATGGCAAGTCCAGGTTTATACCGCAGAGTGCTCCCATCTCCTTCAATCGAGTTCGCTTCGCCGGAAGGGAAGAAGCTGTTCGGTGAAGCGCTTGAGCGAGGAACCATGCAAGGCTTCTTCAAGCTAATTTCATACTACCAGACACAGTCAGAGCCTGCATACTGTGGCCTCGCCACTCTTTCCGTTGTCCTCAATGCCCTTGCCATTGACCCTGGAAGGAAATGGAAAGGTCCTTGGAGATGGTTTGACGAGTCCATGTTGGATTGCTGTGAGCCTTTGGCCAAGGTTAAATTGGAAGGCATTACGTTCGGTAAAGTTGCATGCTTGGCTCGATGTAATGGAGCTAAGGTTGAAGCCTTTCGATCGGATCAAAGCTCTGTTGATGATTTTCGCAACCGTGTGATTTCGTGCTCTTCTTCTGAGGATTGTCATGTGATTGTGTCTTACCACAGGACACCCCTCAATCAGactggaattggccatttttcaccagttggaggatatcatgctgagagagatatggtccttgttttggatgtcgctcgtttcaagtatccGCCTCACTGGGTTCCCCTTACCCTTCTCTGGGAAGGCATGAGCACCATTGATCAAGCAACCAGACTTCGTAGGGGGTACATGATTATTTCGAGGCTTAACAGAGCACCATCTATACTTTATACTGTGAGTTGTAGACATGAAGGTTGGAGCAGTGTTGCCAAATTTCTAACCGAAGATGTCCCTCAACTTCTAAAGTCAGAGGATCTAAAAGACATTCAGGAAGTACTCTCTCTTGCTTTTAAATCTCCTCCCAGTGAATTGAGAGGGTTAATAACATGGATTGCTGAAGTTCGCAGGCAAGAAGATGGGAATCTCACACTGAGTGAGGAGGAGAAAGGAAGGCTAGCTatcaaggctgacatactggaacagattcgaacaactggactcttcaaacacgtgacaaggtggttggattctgaaagttcatgttgtaatactttagcaaaccttggtgacaaagatatgttaccagcacttgctgccagtgtttgttgccaagcggcagatcttttgactgtttgtggtagGCTAGGTTTGTCAGGTGGAAAATGCTGTAGTCAAATAGATGTAAAACATCTGAATGCTGATAGTGAAAATCCAGTAACATTAGTTTCAGGAATTGTTACAACTGGTGGTGGTAGTGAACAAGGAGTTGATGTGTTGGTCCCTTTGTGTCAAAGGGAACCAAGTAGGTTGTGTCTTTCTAATGAAGGTCACTGCATTGGCATGCACCCGTCTACTGCAGATGTCTTAACGGTGCTTTTATTGGCCTTGCCCTTGCATACGTGGTCTGGCATTAAAGAAGAAAAGCTGCGTGTGGAAGCTTTGAGCCTTCTAGCAACAGAAGATCTCCCTCCCCTACTTCAGGAAGAGGTTTTGTTCTTGCGAGACCAACTCCATTTTCTCATGACTGATATCAGTGCTCCTTCTCCCTCATGA 1500 0.3793 MASPGLYRRVLPSPSIEFASPEGKKLFGEALERGTMQGFFKLISYYQTQSEPAYCGLATLSVVLNALAIDPGRKWKGPWRWFDESMLDCCEPLAKVKLEGITFGKVACLARCNGAKVEAFRSDQSSVDDFRNRVISCSSSEDCHVIVSYHRTPLNQTGIGHFSPVGGYHAERDMVLVLDVARFKYPPHWVPLTLLWEGMSTIDQATRLRRGYMIISRLNRAPSILYTVSCRHEGWSSVAKFLTEDVPQLLKSEDLKDIQEVLSLAFKSPPSELRGLITWIAEVRRQEDGNLTLSEEEKGRLAIKADILEQIRTTGLFKHVTRWLDSESSCCNTLANLGDKDMLPALAASVCCQAADLLTVCGRLGLSGGKCCSQIDVKHLNADSENPVTLVSGIVTTGGGSEQGVDVLVPLCQREPSRLCLSNEGHCIGMHPSTADVLTVLLLALPLHTWSGIKEEKLRVEALSLLATEDLPPLLQEEVLFLRDQLHFLMTDISAPSPS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01519 499 Pfam Phytochelatin synthase 7 212 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Gma03g01519 499 Gene3D - 15 220 IPR038156 -
Gma03g01519 499 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 494 - -
Gma03g01519 499 SUPERFAMILY Cysteine proteinases 11 216 IPR038765 -
Gma03g01519 499 Pfam Domain of unknown function (DUF1984) 230 486 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Gma03g01519 499 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 220 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Gma03g01519 499 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 494 IPR040409 GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01519 Gma-Chr3 41443608 41449268 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01519 K05941 - gmx:100782042 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01519 03 41443608 41449268 Gma03g01519 03 41443608 41449268 ECH
Gma19g01574 19 45136117 45141346 Gma03g01519 03 41443608 41449268 GST