Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01517 ATGATTCGCGCGCACTTGCAGGTGCAGGATGTTTGGGATGATGGTCATTGGGATATTAGTTCTCTATTCACTAATATCCCACATGACACAGTGGAGAAGCTGAATCGGTTACGTATTTGGTTGCATAGTAATTCCTCCGATATTATTGTGTGGAAAGGGAGTATTTCAGATACCGATGAAAAAGACTCAGAAATTCAGATTAGTAATCCCACAGATGTAAGGCATGTGGGGCATATTGGATTGGATGGTCACGATGGTCCCTCTGAAAATGATCCCAGCTGGATGAACGAGTTTAAACCCGATGATTCAGTCCAAAGGACCTCTCAAGATTCAAATGAGTTTCCCAAATCATCTAAGCGGCAAACAAAATCAATGGGGAACATAAGAGAGTCTCATGCAAAGGAAAAATCAGACAGGAGGCCAAGGCCACATAAAAAGTCATCCAAAACTAATTCAGACCAAAATGATTCATGCAATGGGGACACGGATTCACTCCAACAACAACAAGGGAATGATTTTCCACCTAAAAAGTCTCGTCCCAAGATGTCAAAAGATGGTTCCAATAATGTTGGTGGTGACTCATCCAAAACCAGATCAAAACCTCATCATCATCATCATCATCATTCTAGAAACTCATACTCCAATAATAATCAAGAAGGCCATGCTAGACACAGTTCCAAGACTAGGACCACACACGGGTCCTTTGAAGAAGATGCACATTCTAGGAACAAACACGGGTCCTTTGAAGAAGAAGAACAATTTCAAAGACGCTCTTGTGAAAATATACTGAAAAGTTACCCAAATTAG 807 0.4102 MIRAHLQVQDVWDDGHWDISSLFTNIPHDTVEKLNRLRIWLHSNSSDIIVWKGSISDTDEKDSEIQISNPTDVRHVGHIGLDGHDGPSENDPSWMNEFKPDDSVQRTSQDSNEFPKSSKRQTKSMGNIRESHAKEKSDRRPRPHKKSSKTNSDQNDSCNGDTDSLQQQQGNDFPPKKSRPKMSKDGSNNVGGDSSKTRSKPHHHHHHHSRNSYSNNNQEGHARHSSKTRTTHGSFEEDAHSRNKHGSFEEEEQFQRRSCENILKSYPN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01517 268 MobiDBLite consensus disorder prediction 123 137 - -
Gma03g01517 268 MobiDBLite consensus disorder prediction 100 122 - -
Gma03g01517 268 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC11 59 253 - -
Gma03g01517 268 CDD CRIB 65 103 - -
Gma03g01517 268 MobiDBLite consensus disorder prediction 152 174 - -
Gma03g01517 268 Gene3D CRIB domain 60 113 IPR036936 -
Gma03g01517 268 MobiDBLite consensus disorder prediction 70 268 - -
Gma03g01517 268 MobiDBLite consensus disorder prediction 222 258 - -
Gma03g01517 268 Pfam P21-Rho-binding domain 66 117 IPR000095 -
Gma03g01517 268 ProSiteProfiles CRIB domain profile. 67 80 IPR000095 -
Gma03g01517 268 SMART PBD_5 67 101 IPR000095 -
Gma03g01517 268 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 59 253 IPR044510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01517 Gma-Chr3 41431014 41433689 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01517 - - gmx:102666076 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01573 19 45130417 45132075 Gma03g01517 03 41431014 41433689 GST
Gma03g01517 03 41431014 41433689 Gma10g00363 10 3482768 3484409 PCT
Gma03g01517 03 41431014 41433689 Gma13g01061 13 24769618 24771031 PCT
Gma10g00363 10 3482768 3484409 Gma03g01517 03 41431014 41433689 PCT
Gma13g01061 13 24769618 24771031 Gma03g01517 03 41431014 41433689 PCT