Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01516 ATGAACATCTTCACCAAGAAACCCACCGCCAAAGAGGCTCTTCGTGAGAGTAAACGTGAAATGACAAACGCCAGTAGAGGTATAGAGAAGGAAATTGGAGCTCTACAATCGGAAGAAAAAAAGCTTGTTGCTGAGATAAAGAGAACTGCTAAGACGGGAAATGAGGCAGCAACTAAAATTCTAGCTCGCCAGTTGATCAGGCTTAGGCAACAAATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACTCAGGCCATGCATGCACATTCTTCTGTTGCTGTTGGCTTGAAAGGTGCTACTAAGGCAATGGCAGCTATGAATAAGAAAATGGAACCGGCAAAGCAAGCTAAAATTATACAAGACTTCCAGAAACAATCAGCGCAGATGGATATGACTACTGAAATGATGTCAGATGCCATAGATGATGCCTTGGATAATGATGAAGCTGAAGAGGAGACTGAAGAGCTGACAAACCAGGTGCTCGATGAAATTGGTGTAGATGTTGCCTCACAGTTATCAGCAGCTCCCAAAGGGAGAGTCGCAACAAAGAATGCTGAAAATGATAGCAGCTCGGGCATTGAAGAACTTGAGAAGCGTTTGGCGGCTCTTAGAAACCCGTAA 639 0.4429 MNIFTKKPTAKEALRESKREMTNASRGIEKEIGALQSEEKKLVAEIKRTAKTGNEAATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMAAMNKKMEPAKQAKIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQLSAAPKGRVATKNAENDSSSGIEELEKRLAALRNP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01516 212 MobiDBLite consensus disorder prediction 181 212 - -
Gma03g01516 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Gma03g01516 212 Coils Coil 11 31 - -
Gma03g01516 212 MobiDBLite consensus disorder prediction 1 30 - -
Gma03g01516 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 212 IPR005024 GO:0007034
Gma03g01516 212 MobiDBLite consensus disorder prediction 9 30 - -
Gma03g01516 212 MobiDBLite consensus disorder prediction 196 212 - -
Gma03g01516 212 Gene3D - 4 181 - -
Gma03g01516 212 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01516 Gma-Chr3 41424225 41428502 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01516 K12192 - gmx:100499888 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01516 03 41424225 41428502 Gma03g01516 03 41424225 41428502 ECH
Gma19g01572 19 45125373 45128713 Gma03g01516 03 41424225 41428502 GST