Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01479 ATGAATTCCGATTGGGACAGCGGCGGCGGTGGCGGTGGCGCGACGCTAATCCCTGGTCTCCCAAACGACGTAGCGGCGTCGATCCTCTCGAAGGTCCCCTACTCCCACCACGGGAGGCTCAAAGCGACATGCAAATCATGGAAACTGCTCCTCTCCTCGAAATCGTTCTTAGCCTCGCTGAACAAACGTAACCACCTTCTCTGCATCTTCCCGCAAGATCCTTCACTCGCTTCACCCTTTCTCTTCGATCCGAACTCGCTCGCGTGGTGCCCGCTCCCTCCCATGCCCTGCAGCCCCCACGTGTACGGCCTCTGCAACTTCGCCGCTGTCTCCGTCGGGCCCCACCTCTATGTCCTTGGTGGGTCCCTCTTCGACACGCGCTCCTTCCCCATCGATCGCCCTTCCCCGTCCTCCGCCACGTTCAGGACGATTTCCGGGGTGTTTCCGGTGGATGAGTATTATAGGGATGCGGTGGTGATGGGAGTGGAGAGTGGCGCGTGGAGAGAGGTTGGGGATATGTGGGGGAATGGGGAGAGGGTCAGGGTTGGGAAGATTGTTGTGGTTGATGATAATGGATGCCCCATGCTTTTCATGCTTGATGCCAATGAGATTTTGAGAAACACGAAGGTCCAGACAACATAA 642 0.5763 MNSDWDSGGGGGGATLIPGLPNDVAASILSKVPYSHHGRLKATCKSWKLLLSSKSFLASLNKRNHLLCIFPQDPSLASPFLFDPNSLAWCPLPPMPCSPHVYGLCNFAAVSVGPHLYVLGGSLFDTRSFPIDRPSPSSATFRTISGVFPVDEYYRDAVVMGVESGAWREVGDMWGNGERVRVGKIVVVDDNGCPMLFMLDANEILRNTKVQTT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01479 213 Gene3D - 46 199 IPR015915 GO:0005515
Gma03g01479 213 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 142 207 - -
Gma03g01479 213 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 13 142 - -
Gma03g01479 213 SUPERFAMILY Kelch motif 70 189 IPR015915 GO:0005515
Gma03g01479 213 SMART fbox_2 20 60 IPR001810 GO:0005515
Gma03g01479 213 Pfam F-box domain 19 56 IPR001810 GO:0005515
Gma03g01479 213 SUPERFAMILY F-box domain 12 71 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01479 Gma-Chr3 41018003 41023123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01479 - - ccaj:109796369 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01479 03 41018003 41023123 Gma03g01479 03 41018003 41023123 ECH
Gma19g01535 19 44703271 44708043 Gma03g01479 03 41018003 41023123 GST