Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01458 ATGGCTCTTGCCCTGAAGTCAAGTTGCTTCTTGCAATTGAAGAAACCTGAGGCTGGTTTCAATGTTTGTTTTTCATCTAAGAAAGCTATAATCTCCGTGAAACGACACACTCCCGTGGCTGCTATCAGGACCATGGAAGCAGTGGGACTCTCTGCAACATTCACCAGGTTGAAAAAAGAAGGAAAAGTAGCTTTCATCCCGTATGTCACTGCTGGTGATCCTGACCTTTCAACCACAGCAGAAGCACTGAAAGTGCTTGATTCATGTGGGTCTGACATAATTGAGCTAGGTGTTCCATACTCTGATCCTTTGGCAGATGGTCCTGTTATCCAGGCTGCTGCTACAAGATCTTTAGCAAAGGGGACCAATTTGAATGCGATTATTGATATGTTGAAGGAGGTTGTTCCGCAACTGTCATGTCCAATTGCACTGTTTACATATTACAATCCAATACTGAAGCGTGGTACTGATAAATTTATGTCCACTATAAGAGACAGTGGTGTACATGGGCTTGTAGTCCCAGATGTCCCTCTGGAGGAGACGGAAACTTTAAGGACAGAAGCTAAGAAACATGGAATTGAACTGGTACTCCTCACAACACCCACAACTCCAACAAACCGAATGAGAGCCATTGTTGATGTGGCAGAAGGATTTGTGTATCTTGTGAGCTCAGTGGGGGTCACTGGAGCCCGAGCATCAGTTAGTGGTTCTGTTCAGTCTCTTTTGAAGGAAATTAAAGAGGCAACTACTAAACCTGTGGCAGTTGGTTTTGGAATATCAAAACCTGAGCATGTGAAACAGGTAGTGGTATGGGGAGCTGATGGTGTGATTGTTGGCAGTGCTATAGTGAAGGTGCTTGGTGAGGCCAAATCTCCTCAAGAGGGATTGAAAGAACTTGAAGTTTTCACCCGCTCCTTAAAAGCGGCACTTCCTTAA 936 0.4466 MALALKSSCFLQLKKPEAGFNVCFSSKKAIISVKRHTPVAAIRTMEAVGLSATFTRLKKEGKVAFIPYVTAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAKGTNLNAIIDMLKEVVPQLSCPIALFTYYNPILKRGTDKFMSTIRDSGVHGLVVPDVPLEETETLRTEAKKHGIELVLLTTPTTPTNRMRAIVDVAEGFVYLVSSVGVTGARASVSGSVQSLLKEIKEATTKPVAVGFGISKPEHVKQVVVWGADGVIVGSAIVKVLGEAKSPQEGLKELEVFTRSLKAALP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01458 311 Hamap Tryptophan synthase alpha chain [trpA]. 60 309 IPR002028 GO:0004834|GO:0006568
Gma03g01458 311 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 46 310 IPR002028 GO:0004834|GO:0006568
Gma03g01458 311 Gene3D Aldolase class I 49 311 IPR013785 -
Gma03g01458 311 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 46 310 - -
Gma03g01458 311 CDD Tryptophan_synthase_alpha 64 307 IPR002028 GO:0004834|GO:0006568
Gma03g01458 311 TIGRFAM trpA: tryptophan synthase, alpha subunit 54 307 IPR002028 GO:0004834|GO:0006568
Gma03g01458 311 SUPERFAMILY Ribulose-phoshate binding barrel 50 290 IPR011060 -
Gma03g01458 311 ProSitePatterns Tryptophan synthase alpha chain signature. 94 107 IPR018204 GO:0004834
Gma03g01458 311 Pfam Tryptophan synthase alpha chain 54 309 IPR002028 GO:0004834|GO:0006568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01458 Gma-Chr3 40810763 40815464 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01458 K01695 - gmx:100808400 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01518 19 44528807 44534096 Gma03g01458 03 40810763 40815464 GST