Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01436 ATGGCACCAAGAAGAATTGAGATGCTGCTGAGCATGTCCCTTGTAATGGTTCTTTGGGGTGTCACATTGGCTCAATCTGATCAATCAAGTAGTTGCACCAATGTGTTCATAAGTCTTGCTCCATGCCTTGACTATGTTACAGGAAATGCCTCTATCCCTTCTTCTTCTTGTTGCTCTCAACTTGCCTTTGTGGTACGGTCACAGCCACTGTGCCTATGTGAGGTTGTTAATGGTGGTGCTTCATCTATTGCTGCAAGTTTCAACATCAATCAGACTAGGGCTTTGGCACTCCCTACTGCTTGCAATGTTCAGACACCTCCTATTACCTCCTGCAGTGCCTCGGCTTCTTCCTCACAAGGTGTTTCTGTTTCCTACTTTCCAAATTCCCCTTCAGGAATTGGATCTAGCACTGTTTCATCAACGATCGGAGGCAGTAGAAGTGTCGGTGCCTCATATCATGGAAATTCAAGTTCAACAAAATTGCCATGTTCTTTGCTTGTCATCATGTTTTTCCTTGCAACGACTTTGACTTTCACCTTCAAGACCATGACCTAG 555 0.4468 MAPRRIEMLLSMSLVMVLWGVTLAQSDQSSSCTNVFISLAPCLDYVTGNASIPSSSCCSQLAFVVRSQPLCLCEVVNGGASSIAASFNINQTRALALPTACNVQTPPITSCSASASSSQGVSVSYFPNSPSGIGSSTVSSTIGGSRSVGASYHGNSSSTKLPCSLLVIMFFLATTLTFTFKTMT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01436 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 5 182 IPR043325 -
Gma03g01436 184 CDD AAI_LTSS 39 103 - -
Gma03g01436 184 PANTHER LIPID TRANSFER PROTEIN 5 182 - -
Gma03g01436 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 114 IPR036312 -
Gma03g01436 184 Gene3D - 29 109 IPR036312 -
Gma03g01436 184 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Gma03g01436 184 PRINTS Plant phospholipid transfer protein signature 52 66 IPR000528 GO:0006869|GO:0008289
Gma03g01436 184 PRINTS Plant phospholipid transfer protein signature 88 105 IPR000528 GO:0006869|GO:0008289
Gma03g01436 184 Pfam Probable lipid transfer 15 111 IPR016140 -
Gma03g01436 184 SMART aai_6 32 111 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01436 Gma-Chr3 40574993 40576785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01436 5 180 Lipid Metabolism Gene Families AT3G22600 40.223 1.76e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01436 - - gmx:100801492 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01436 03 40574993 40576785 Gma03g01436 03 40574993 40576785 ECH
Gma19g01493 19 44284666 44286090 Gma03g01436 03 40574993 40576785 GST
Gma10g00270 10 2473397 2474997 Gma03g01436 03 40574993 40576785 PCT