Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01435 ATGGAGATTCCACAAGTTGTGGGGGAAGAAAAAATGAAAAGGAATTTAGAATATGCGGAGAGGCGAGGGGAAGTAACGCAAAACCGAAACGCACAACATTCACATCCACATTGTAAAACTCTTTATACATACCAATTCCCTTCCTTTCCTCTCTGTCTCTTCGCAATCCCTTTCTTCTTCGCTGCCAGGTGCACCTTCTGTAATAACAGAAAGTGCCTTGCACGTGTTCCCTTCTACTTTCACCCAGTGTTAGAGCTTGTCTCTCGTTCTTGGCAAGCAGCTATTCGTAGCCCTGAACTATTTAAAGCTCGGCAGGAGGTTGGTTCAACTGAGGATCTGTTATGTGTCTGTGCTTTTGATCCAGAGAACTTATGGCAGTTGTATGACCCTATGCGAGATCTCTGGATTACACTCCCTGTTCTTCCCTCAAAGATCAGGCACCTTTCCAACTTTGGTGCTGTTTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGTGGAAGTGATGCTGTTGATCCTTTGACTGGTGACCAAGATGGTTGTTTTGCAACAGATGAAGTTTGGTCATATGACCCTGTAGTCCGGCAGTGGGCCCCTCGTGCGTCAATGCTTGTTCCCCGTTCTATGTTTGCATGCTGCGTTTTGAATGGAAAAATTGTTGTGGCTGGGGGCTTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGACAAGGATGTTTGGATTCCAATGCCTGATCTTCATCGCACTCATAATTCAGCCTGTTCGGGGGTAGTGATTGGTGGGAAGGTGCATGTACTGCACAAGGATTTGTCAACAGTGCAAGTTTTAGACAATGCAGGGCCCGGTTGGACCGTTGAGGAATGCGTGTGGCTCCAAGGGCAGATGGCAGTTGTCGGCGATGCACTTTATGTAATGAGCCATGGATTAATCTTCAAGCAGGACAAAGAAGTGAGAAAGGTTGTAGGTTCAGCATCCGAGTTTCGAAAGAGAATTGGCTTTGCAATGACTGGACTAGGTGATGACTTATACGTGATTGGAGGCTTCATTGGACCAGATAGATGGAATTGGGACATTAAGCCATTATCCGAAGTTGATGTTCTCACACTTGGAAGTGAGAGACCAACTTGGCGCCAAGCAGCTCCGATGACACGGTGTCATGGTCCTATTCTTGGTTGTACGCTGCTGAGAATTTAG 1206 0.4619 MEIPQVVGEEKMKRNLEYAERRGEVTQNRNAQHSHPHCKTLYTYQFPSFPLCLFAIPFFFAARCTFCNNRKCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCVCAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPDKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDLSTVQVLDNAGPGWTVEECVWLQGQMAVVGDALYVMSHGLIFKQDKEVRKVVGSASEFRKRIGFAMTGLGDDLYVIGGFIGPDRWNWDIKPLSEVDVLTLGSERPTWRQAAPMTRCHGPILGCTLLRI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01435 401 Pfam Kelch motif 205 250 IPR006652 GO:0005515
Gma03g01435 401 Pfam Kelch motif 148 202 IPR006652 GO:0005515
Gma03g01435 401 Pfam Kelch motif 334 386 IPR006652 GO:0005515
Gma03g01435 401 Gene3D - 119 398 IPR015915 GO:0005515
Gma03g01435 401 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 71 401 - -
Gma03g01435 401 SMART kelc_smart 345 400 IPR006652 GO:0005515
Gma03g01435 401 SMART kelc_smart 217 264 IPR006652 GO:0005515
Gma03g01435 401 SMART kelc_smart 159 216 IPR006652 GO:0005515
Gma03g01435 401 SUPERFAMILY Kelch motif 117 388 IPR015915 GO:0005515
Gma03g01435 401 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 71 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01435 Gma-Chr3 40562842 40567543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01435 71 244 Miscellaneous Gene Families AT4G33900 30.055 4.85e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01435 - - gmx:100800954 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01435 03 40562842 40567543 Gma03g01435 03 40562842 40567543 ECH
Gma19g01492 19 44272261 44277983 Gma03g01435 03 40562842 40567543 GST