LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma03g01424	ATGGCTTCTCACTTCCGCCTTCCGTCTTTCTCTTCTTCTAACCATTTCCTTTTAACATCTTCTTCTTCTTCTTCTTCTATCTCTCTTCACCACTTCTCCAAATCCTCTCTGGGTGCCGTGTCGTCTGAGACTAACGACAAACAAGAGATAAGATGCAGAGCAATATCCAAACCACGAACACAAGAATGTTCAGACATATTTCAGGGTAGTCTAGCAACGTTAAAGTTTCGTGAGATTAATGTGGAAGATGACATAGAAGAGGAGCAAGACATTGGGGCTTTGGTGGCAAATGAGATCAAGAAGAGAGTGGACACTATCAAATCAATATTGGGTTCCATGGAAGATGGAGAGATAACAGTATCTGCTTATGACACTGCTTGGGTTGCTCTGATAGAAGATGTTCATGGAACTGGTGTCCCTCAATTTCCATCGAGTCTAGAATGGATAGCGAAAAATCAACACCCCGATGGTTCATGGGGTGATAAGGAATTATTCTCAGCCCATGATCGGATTATTAACACGTTGGCTTGTGTTATTGCATTAAAAACATGGAATATGCACCCTGAAAAGTGTGAGAAAGGAATGGCATTTTTTAGAGAGAATCTTGGCAAGCTTCAGAACGAGAATGTAGAGCATATGCCAATTGGTTTTGAAGTAGCCTTTCCATCACTTCTTGACATGGCTCGTGGCTTGGACATTGAAGTGCCGAACAATTCCCCAATCCTTAATAAAATCTTCGCAATGAGAAACGTAAAACTCACAAGAATACCAAGAGCTATGAGGCATAAAGTGCCCACAAGTCTCCTTCATAGCTTGGAAGGGATGTCAGGCCTTGACTGGAAAGAACTTCTAAAACTGCAGTCTCAAGACGGGTCTTTCTTGTTTTCTCCGTCATCCACAGCCTTTGCTCTCATGCAAACTAAGGACCAAAATTGCCACAATTACTTGAATAAAGTGGTCAAGAGGTTCAATGGGGGAGTTCCAAACGTGTATCCAGTGGATTTGTTCGAACATATTTGGGTGGTTGATAGGCTTGAACGTCTAGGAATATCTCAGTATTTTCAGCAAGAGATCAAGGACTGTTTGAGTTATGTTTACAGATATTGGACTGAAAAGGGTATTTGTTGGGCAAGAAATTCAAATGTTCAAGACATTGATGACACGGCAATGGGTTTCAGACTATTAAGATTACACGGTTACCAAGTTTCAGCCGATGTGTTCAAGAACTTTGAGAGAAATGGTGAATTTTTCTGCTTTACGGGGCAGACCACACAAGCAGTGACAGGAATGTTTAATCTGTATAGGGCCACACAAATCATGTTCCCGGGAGAGAGAATTCTTGAGCACGGGAAGCACTTCTCTGCCAAATTTTTGAAGGAGAAGAGAGCAGCAAATGAGCTTGTAGATAAATGGATCATAATGAAGAACCTGGCAGAAGAGGTTGCGTATGCTTTGGACGTACCATGGTATGCAAGCCTACCTCGAGTGGAGACAAGATTCTACATTGATCAATACGGCGGTGAGAGTGACGTGTGGATAGGCAAAACCCTTTATAGGATGGCATATGTGAACAACAATAACTATCTCGAGCTTGCTAAATTAGATTACAACAATTGCCAGGCACTGCATCTAATAGAGTGGGGGAGAATTCAAAAGTGGTACTCAGAATCTAGATTGGAGGAGTTTGGAATGAACAGAAGAACGCTTCTATTGGCCTATTTTGTGGCAGCAGCAAGCATATTTGAGCCTGAAAAGTCTCGTGTGAGACTAGCGTGGGCACAAACCAGTATCTTACTTGAGACCATAACATCCTATGTTAGTGATGCAGAAATGAGGAAAGCTTTCATGAAAAAATTCAGTGACTGTCTTAACAGGCGAGACTACTCCATTGGCTGGAGGTTGAACAGGAACAGAACAGGACATGGACTCGCTGAGACTTTGGTTGCCACCATAGATCAAATCTCGTGGGATATACTCGTGTCTCACGGTCATGAAATTGGATATGACATGCATCGCAATTGGGAAAAGTGGCTTTCGAGTTGGCATCGGGAAGGAGACAAATGTAAAGGACAAGCCGAGCTTTTGGCGCAGACAATAAACCTATGTGGCGGGCATTGGATTTCCGAGGATCAAGTGTCGGATCCACTGTATCAGAGTCTCCTTCAACTCACTAACAATCTCTGCAATAAACTTCGTTGCCACCAAAAGGACAAGGAACTTGAGAGCAGCAACAGCGGCACGAATGTAAACAGCATGATCACCCAAGAAGAAGAGTCAAAAATGCAAGAACTCGTGCAATTGGTGCACCAAAAATCTCCAACTGGCATTGATTTCAATATCAAGAATACTTTCCTCACAGTGGCCAAGAGTTTTTACTATACAGCTTTTTGTGATTCAAGGACCGTCAACTTCCATATTGCCAAAGTTCTGTTTGATGAAGTCGTTTAA	2448	0.4248	MASHFRLPSFSSSNHFLLTSSSSSSSISLHHFSKSSLGAVSSETNDKQEIRCRAISKPRTQECSDIFQGSLATLKFREINVEDDIEEEQDIGALVANEIKKRVDTIKSILGSMEDGEITVSAYDTAWVALIEDVHGTGVPQFPSSLEWIAKNQHPDGSWGDKELFSAHDRIINTLACVIALKTWNMHPEKCEKGMAFFRENLGKLQNENVEHMPIGFEVAFPSLLDMARGLDIEVPNNSPILNKIFAMRNVKLTRIPRAMRHKVPTSLLHSLEGMSGLDWKELLKLQSQDGSFLFSPSSTAFALMQTKDQNCHNYLNKVVKRFNGGVPNVYPVDLFEHIWVVDRLERLGISQYFQQEIKDCLSYVYRYWTEKGICWARNSNVQDIDDTAMGFRLLRLHGYQVSADVFKNFERNGEFFCFTGQTTQAVTGMFNLYRATQIMFPGERILEHGKHFSAKFLKEKRAANELVDKWIIMKNLAEEVAYALDVPWYASLPRVETRFYIDQYGGESDVWIGKTLYRMAYVNNNNYLELAKLDYNNCQALHLIEWGRIQKWYSESRLEEFGMNRRTLLLAYFVAAASIFEPEKSRVRLAWAQTSILLETITSYVSDAEMRKAFMKKFSDCLNRRDYSIGWRLNRNRTGHGLAETLVATIDQISWDILVSHGHEIGYDMHRNWEKWLSSWHREGDKCKGQAELLAQTINLCGGHWISEDQVSDPLYQSLLQLTNNLCNKLRCHQKDKELESSNSGTNVNSMITQEEESKMQELVQLVHQKSPTGIDFNIKNTFLTVAKSFYYTAFCDSRTVNFHIAKVLFDEVV	815

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma03g01424	815	Gene3D	-	105	537	IPR036965	GO:0010333\|GO:0016829
	Gma03g01424	815	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	122	305	IPR008930	-
	Gma03g01424	815	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	290	510	IPR008930	-
	Gma03g01424	815	Gene3D	-	122	334	-	-
	Gma03g01424	815	PANTHER	ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC	83	811	-	-
	Gma03g01424	815	SUPERFAMILY	Terpenoid synthases	524	798	IPR008949	-
	Gma03g01424	815	CDD	Terpene_cyclase_plant_C1	330	812	IPR044814	GO:0010333\|GO:0016102
	Gma03g01424	815	SFLD	Terpene Cyclase Like 1 N-term	95	519	-	-
	Gma03g01424	815	Pfam	Terpene synthase family, metal binding domain	529	688	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Gma03g01424	815	Pfam	Terpene synthase, N-terminal domain	279	485	IPR001906	GO:0010333\|GO:0016829
	Gma03g01424	815	SFLD	Terpene Cyclase Like 1 N-term - Enzymatic	95	519	-	-
	Gma03g01424	815	Gene3D	Farnesyl Diphosphate Synthase	539	815	IPR008949	-
	Gma03g01424	815	PANTHER	ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC	83	811	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma03g01424	Gma-Chr3	40426240	40436571	Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma03g01424	K04120		-	gmx:100808585	1624.76

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma03g01424	03	40426240	40436571	Gma03g01424	03	40426240	40436571	ECH
	Gma19g01484	19	44139671	44151378	Gma03g01424	03	40426240	40436571	GST