Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01401 ATGAAGCTTGTCAGGTTTCTCATGAAGCTGAACAACGAAACCGTTTCAATCGAGCTCAAGAACGGAACAGTTGTTCATGGCACCATTACAGGTGTTGATATCAGTATGAATACACATTTGAAAACAGTTAAACTAACTCTGAAAGGGAAAAACCCAGTTACTTTGGATCATCTCAGTGTGAGAGGCAACAACATTCGATATTATATCCTTCCTGACAGCTTGAATCTTGAGACTTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCGTGGGCGTTAA 345 0.458 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPKIKPKKPTAGKPLGRGRGRGRGRGRGRGR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01401 114 MobiDBLite consensus disorder prediction 85 114 - -
Gma03g01401 114 SUPERFAMILY Sm-like ribonucleoproteins 4 113 IPR010920 -
Gma03g01401 114 Pfam LSM domain 5 69 IPR001163 -
Gma03g01401 114 SMART Sm3 5 70 IPR001163 -
Gma03g01401 114 MobiDBLite consensus disorder prediction 93 114 - -
Gma03g01401 114 CDD Sm_D1 2 93 IPR034102 GO:0000387
Gma03g01401 114 Gene3D - 1 49 - -
Gma03g01401 114 Gene3D - 50 82 - -
Gma03g01401 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 110 IPR027141 GO:0006396
Gma03g01401 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01401 Gma-Chr3 40145530 40148192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01401 K11087 - gmx:100793721 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01401 03 40145530 40148192 Gma03g01401 03 40145530 40148192 ECH
Gma19g01464 19 43873269 43877455 Gma03g01401 03 40145530 40148192 GST