Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01391 ATGTTGTTCTTCTCGTACTTCAAGGATTTGGTGGGGAGGGAAGTAATCGTGGAGCTGAAGAACGATTTGGCCATCAAAGGGACGTTGCATTCTGTTGATCAGTACCTCAACATCAAGCTCGAAAACACTAGCGTCGTCAATCAAGAAAAGTACCCTCACATGCTTTCTGTAAGGAACTGCTTCATCAGAGGTTCGGTAGTGAGATATGTGCAATTGCCTCCAGAAGGTGTGGACATTGAATTATTGCACGATGCCACAAGAAGAGAAGCTCGGGGCGGTTAA 282 0.4574 MLFFSYFKDLVGREVIVELKNDLAIKGTLHSVDQYLNIKLENTSVVNQEKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01391 93 CDD LSm2 2 90 IPR016654 GO:0006397
Gma03g01391 93 Gene3D - 1 92 - -
Gma03g01391 93 SUPERFAMILY Sm-like ribonucleoproteins 3 92 IPR010920 -
Gma03g01391 93 PIRSF Lsm2 1 93 IPR016654 GO:0006397
Gma03g01391 93 Pfam LSM domain 7 71 IPR001163 -
Gma03g01391 93 SMART Sm3 5 72 IPR001163 -
Gma03g01391 93 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 1 91 IPR016654 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01391 Gma-Chr3 40015173 40018363 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01391 K12621 - gmx:102665888 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01391 03 40015173 40018363 Gma03g01391 03 40015173 40018363 ECH