Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01378 ATGCGCTGCATTTTCGAGGAAAATGATGTTGTTTGTGCCGAAGTTTGTGGTTTCCAGCATGATGGCTTACACCTTCAAGCAAGGAGTCGGAAATATGGAAAGCTTAATAGAGGTCAACTGCTTATAGTCCCACCTTATTTAGTGAAGAGACAAAAACAACATTTCCATCATCTTGAGGAGTTTGGTATTGATTTGATACTTGGCTGTAATGGATTCATATGGGTTGGGGAACATGTTGAAGCCAAAGATGACATGGTAGAAGATCAAGTGAGCCAATCTGATCCACAAGTTTTATTGCCTAATAACATTGTATCAGTCTTGAAGAACAAGAGAAAACTTACACAATATTGGAGACAAGAAATTACATATGCAGAGCTGCTAATGCTGTTAGAGTATTGTCAACCTTAG 408 0.3848 MRCIFEENDVVCAEVCGFQHDGLHLQARSRKYGKLNRGQLLIVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMVEDQVSQSDPQVLLPNNIVSVLKNKRKLTQYWRQEITYAELLMLLEYCQP 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01378 135 Pfam KH domain 38 79 IPR004088 GO:0003723
Gma03g01378 135 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 38 97 IPR036612 GO:0003723
Gma03g01378 135 PANTHER PNAS-3 RELATED 1 91 IPR026699 GO:0000178|GO:0003723
Gma03g01378 135 PANTHER EXOSOME COMPLEX COMPONENT RRP4 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01378 Gma-Chr3 39924397 39925192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01378 K03679 - gmx:100776358 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01378 03 39924397 39925192 Gma03g01378 03 39924397 39925192 ECH
Gma19g01446 19 43675919 43678109 Gma03g01378 03 39924397 39925192 GST