Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01375 ATGATGACAGACGAGGAATTGTTGCAGAAACTTGAAGACTTAACCAAAAACGCCCAACACCACCACTTGGAGACTCTCCGCTCGATCCTTCTTCACAATGGAATCGTGCACTATCTTCAATCCTTCAAGAAGGGTTCTCTTCTTCATCTTGATCCATCAACTTTCGCACGTGTCGTGCCCTTGTCTACGTATGAGGACTACGTTGACTACATTAACCAGATGGCAGAAGGGAAAGATGACCCTTTTCTCTCCGTTGACCCTCTCCGCTGCTTCTTTTACAGCTCGGGAACAAGTTCAAGCACCATGAAACCGAAATTGATCCCTTACTTTGATTCAAGCCTTTCCAAAGCTGCCTCCTTTATTGGTCACCGAGGCAGTGTTGCTGTTCGTCAAAGGCTATTTCCTCCAAGGCCAGAAGTGAACAAGATCCTATGGTTTCTCTATGCTGACAACATTACTACCACTAAATGTGGCTTGAAAGTCATGGCTGCATCTACATACCCTTTGCAAAGTGGTAATGCTACCCCTCAACAACTTGCTGCATTTTCCAGTCCCCTAGAAGTGATTCTTGCAACTAATGTTGAGAATCAAATGTACTGCCACCTTCTATGTGGCCTTAGGAATCTTGACCTTATAGATGGAATTGCAACCCCTTATGCTATAGGCTTGATTAAAGCATTTGGTTTTTTGGAGTCCAAGTGGGAGCAGCTATGTGATGATCTTGACCATGGATTTCCATGTAATGAAATTTCTGAGGGGGCAATGAGGGAAGCTGTGACCAACACACTTGGTGGACCTCAGCCAGAATTGGCAAATAGAATAAGGTTAATCTGTGAAGGTAATAACTGGGGCGGAATTGTGTATAGATTGTGGCCAAACATTCGTTATATCAGGTGTGTAACCACTGGAAGCATGAAGCAGTACTACCAAAAGCTCAAGTATTATGCAGGAGAGGTACCTATTTTAGGAGGAGATTATTTTGCTTCAGAGTGCTGTGTTGGTCTAAATTTAGACATAATGCAACCCCCTGAGACAACGCGGTTTGTGATGCTTCCAACTTTTGCCTACTTTGAGTTTCTTCCATTTAACATAAATGAAGACAATGATGCTAGCAAGGAAGCTGTGGACTATAGCAGTGTAGAGGTTGGCAAGATGTATGAAGTGGTTGTTACTACTTACAGAGGATATTACCGATACCGTTTGGGCGATATAGTGAGAGTTGTTGGTTTCTATAATTCATCTCCACTAGTAGAGTATGTGATGAGAGCACCTAAAACTCCTGCTGAGATTGTGACTGAGAAGGACTTGATTTCAGCAGTTGAAAATTTTCAACTTGCACTTAGAGGTGCTATGAGAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGACCAGGAGTCAATGCCGAAGCAGTTGAAGGTATTTGTGGAAGTCCAAGAGGAATCTGATTTTCTGGAGGATAAGCTAGAGGAATCAGTTAGAGTTTTGAGAAGTTGTATCTCCTCTCTTGAGAGTGGGTTGGGAGCTATATACAAGGTGCAGAAGGATAAAGGTCAACTAAGGAGCTTACGGATATTCATCATAAGGCCTGGAGCTTTTGATCAGTTATCAGAATTAGCCATTAAAAATGGAACATCAGCTAGTCAATATAAACCACCCAAGATCATAAGGAATCATGGAGTTGTCAAACTCTTGGAAAAATTAGCCTTTGTGGCAGTATCATTCGATGGCTAA 1731 0.4229 MMTDEELLQKLEDLTKNAQHHHLETLRSILLHNGIVHYLQSFKKGSLLHLDPSTFARVVPLSTYEDYVDYINQMAEGKDDPFLSVDPLRCFFYSSGTSSSTMKPKLIPYFDSSLSKAASFIGHRGSVAVRQRLFPPRPEVNKILWFLYADNITTTKCGLKVMAASTYPLQSGNATPQQLAAFSSPLEVILATNVENQMYCHLLCGLRNLDLIDGIATPYAIGLIKAFGFLESKWEQLCDDLDHGFPCNEISEGAMREAVTNTLGGPQPELANRIRLICEGNNWGGIVYRLWPNIRYIRCVTTGSMKQYYQKLKYYAGEVPILGGDYFASECCVGLNLDIMQPPETTRFVMLPTFAYFEFLPFNINEDNDASKEAVDYSSVEVGKMYEVVVTTYRGYYRYRLGDIVRVVGFYNSSPLVEYVMRAPKTPAEIVTEKDLISAVENFQLALRGAMRIEIVEFASFLDQESMPKQLKVFVEVQEESDFLEDKLEESVRVLRSCISSLESGLGAIYKVQKDKGQLRSLRIFIIRPGAFDQLSELAIKNGTSASQYKPPKIIRNHGVVKLLEKLAFVAVSFDG 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01375 576 Pfam GH3 auxin-responsive promoter 10 557 IPR004993 -
Gma03g01375 576 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 572 IPR004993 -
Gma03g01375 576 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01375 Gma-Chr3 39906353 39909850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01375 8 566 EF-hand Containing Proteins AT1G23160 32.337 1.33e-93 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01375 K14487 - gmx:100786829 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01375 03 39906353 39909850 Gma03g01375 03 39906353 39909850 ECH