Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01352 ATGGCATCGAAGCACGGTGTGAAATCGAGAAGGTTCGGATTGAGTGGCTCAAAAGCTGCGAATTCGCCTTCATCTTCCACCGCGTCGTCTTCTAAGCAGTTTCAGGAGTCATCGGCTGATGGTCTGAGCTCGTCGGCGAGGAGTAAGCCGCAGCATTTTGCTCCAGAAACTGTTGCGGCTGCGCCACCTTTGGATGGACAGAGAGTGAAGGAAAATGTCACGGTGACGGTCCGATTTCGGCCTCTGAATCCAAGGGAAATTCGACAAGGAGAGGAGATTGCTTGGTATGCAGATGGAGAAACTATAGTGCGAAATGAGTATAATCCGTCCATAGCATATGCATACGATCGTGTCTTTGGTCCCACAACCACAACTCGTCAGGTCTATGATGTTGCTGCTCAGCATGTTGTTAGTGGTGCTATGGAGGGCATCAATGGTACAGTATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCCCTTTCCGTGAAGGATGTTTTTAGCATTATCCAAGAGACTCCAAACCGAGAGTTTCTCCTTCGAGTTTCATACTTGGAGATCTACAATGAGGTGGTTAATGACTTATTAAATCCAGCAGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGCACCTATGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTGTCCCTTATTGCAGCTGGAGAAGAGCACAGACATGTTGGGTCTACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACGCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTAACACTGTCACAACTGAATCTCATCGATCTAGCAGGTTCTGAGAGCTCAAAAGCTGAAACAACTGGTATGAGAAGGAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACTCTTGGAACTGTTATTTCAAAATTGACTGAAGATAAAGCTAGTCACATACCTTACAGGGATTCCAAATTGACTAGAGTTCTTCAGTCTTCGCTCAGTGGTCATGGACGTGTTTCTCTTATTTGCACAGTAACCCCTTCATCTAGTAGTACTGAAGAGACACATAATACATTGAAGTTTGCTCACCGGGCAAAGTACATTGAAATACGAGCAGCACAAAACAAGATAATTGATGAGAAATCACTTATCAAGAAATACCAACAAGAGATTCAATGCTTAAAGGAAGAACTGGAAAAATTAAAGAGGGGTATTGTCACAGTTCAACCAAAAGATACCGAGGATGATGACATTGAGCTCCTAAAACAGAAGTTAGAAGATGGTCAAGTTAAGTTGCAATCCCGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTATTAGGCAGAATTCAACGGTTGACTAAGTTGATTTTGGTCTCCACAACAGCATCATCGTCCACAAGATTTCCTAACAGACCTGGTCCTCGTAGAAGACATTCCTTCGGGGAAGAGGAGCTGGCATACCTTCCATACAAAAGGCGGGATTTAATCTTAGACGAGGAAAATATTGATTTGTATGTTAATCTGGAGGGAAATGCTGCAACAGCTGATGATTCTTTTAAGGGCGAGAAAAAGATGAAGAAACATGGATTACTAAATTGGTTGAAGTTACGTAAACGAGACAGTGCCTTGACTGGCACTAGTGATAAATCCAGTGGAGCAAAATCTACTAGCACACCTTCCACACCTCAAGCAGAAAGTGGTAATCATGTGGAGTCCAGACTTTCTCATTCTCAACCTGCAGAAAGCTCTCCCTCTGCTGATCTTGCATCAGAGGCAAGAGAGGATAAATATATTCATGAGGACAGTTTATTGGGACAGGAGACTCCTTTGACAAGCATCAAATCGGTTGATCAGATTGATCTTCTGAGGGAGCAGCACAAGATTTTATCTGGAGAAGTGGCACTTCATTCAAGTGCTTTGAAGAGGCTATCTGACGAAGCAACAAGAAATCCTCAGAATGGTCATATTGATGTGGAGATGAAAAAGTTGAAGGATGAAATTACAGCAAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATTTCTAATTCTTTCATTGCTTCAGATAAGACAGAACACTCAGGAGCATTGCAGACTGTTGCTGAGCTGATGGCACAATTAAACGAGAAATCCTTTGAACTTGAGGTCAAAGCAGCAGATAACCGTGTAATTCAAGAACAGCTTAATCAGAAGATTTGTGAATGTGAAAGCCAGCAAGAAACGATTGCCTCTCTTAAACAGCAACTTGCTGATGCATTGGACTTGAGAAATTTCAGCCATGTAGTCAATCATTCACAAAATTTCTCTGGAACCAAAGATTATTGTGGTGAACTTCATCTTGACAAGGGGAATGTGACAATAAACAATTCAAATGAAGGGATTCAATTGCAAGCACAGATAAGTGAGATAGAAGATCTGAAGCAGAGAGTGGCAGAACTAACAGAATCAAAGGAGCAGTTAGAATTTAGAAATCAGAAATTGGCAGAAGAGAGTTCCTATGCTAAAGGGCTTGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTTGCCAAATTCATGAACCAGAACGAGAGACTAGCTGCTGAGCTAGCTGCATCCAAGAATTCACCCGCTGAACGTAGAACTAGTGGCACAGTCCAAAATGGACGAAGGGAAAGTCATGCTAGAGTTAGACGAAATGATCAGGGTGCATCAAACGCCAATATCAAGAGAGAATTAGCCTTGAGCAAAGAAAGGGAACTTTCATATGAAGCTTCCCTTTTAGAGAAAGATGAGAAAGAGGCCGAACTTCAAAGAAAGATTGAGGAGTCAAAGAAAAGAGAAGCATACCTGGAAAATGAACTTGCCAACATGTGGGTCCTTGTGGCAAAGCTAAAAAAGTCACAAGGAGCTGAAACTGATGTTTCGGTGTCAACCATAGAGAATTTGCAGTTGGATGGTTGA 3024 0.4233 MASKHGVKSRRFGLSGSKAANSPSSSTASSSKQFQESSADGLSSSARSKPQHFAPETVAAAPPLDGQRVKENVTVTVRFRPLNPREIRQGEEIAWYADGETIVRNEYNPSIAYAYDRVFGPTTTTRQVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLSVKDVFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSTEETHNTLKFAHRAKYIEIRAAQNKIIDEKSLIKKYQQEIQCLKEELEKLKRGIVTVQPKDTEDDDIELLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTTASSSTRFPNRPGPRRRHSFGEEELAYLPYKRRDLILDEENIDLYVNLEGNAATADDSFKGEKKMKKHGLLNWLKLRKRDSALTGTSDKSSGAKSTSTPSTPQAESGNHVESRLSHSQPAESSPSADLASEAREDKYIHEDSLLGQETPLTSIKSVDQIDLLREQHKILSGEVALHSSALKRLSDEATRNPQNGHIDVEMKKLKDEITAKSEQIDLLEKQISNSFIASDKTEHSGALQTVAELMAQLNEKSFELEVKAADNRVIQEQLNQKICECESQQETIASLKQQLADALDLRNFSHVVNHSQNFSGTKDYCGELHLDKGNVTINNSNEGIQLQAQISEIEDLKQRVAELTESKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKFMNQNERLAAELAASKNSPAERRTSGTVQNGRRESHARVRRNDQGASNANIKRELALSKERELSYEASLLEKDEKEAELQRKIEESKKREAYLENELANMWVLVAKLKKSQGAETDVSVSTIENLQLDG 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01352 1007 MobiDBLite consensus disorder prediction 905 919 - -
Gma03g01352 1007 Coils Coil 393 427 - -
Gma03g01352 1007 SMART kinesin_4 70 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01352 1007 Coils Coil 752 779 - -
Gma03g01352 1007 Coils Coil 445 479 - -
Gma03g01352 1007 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01352 1007 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01352 1007 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01352 1007 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01352 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 426 IPR027417 -
Gma03g01352 1007 MobiDBLite consensus disorder prediction 1 65 - -
Gma03g01352 1007 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma03g01352 1007 MobiDBLite consensus disorder prediction 566 615 - -
Gma03g01352 1007 PANTHER CENTROMERE PROTEIN E 48 1001 - -
Gma03g01352 1007 Coils Coil 684 704 - -
Gma03g01352 1007 Gene3D Kinesin motor domain 64 422 IPR036961 -
Gma03g01352 1007 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 48 1001 - -
Gma03g01352 1007 Coils Coil 862 896 - -
Gma03g01352 1007 MobiDBLite consensus disorder prediction 890 928 - -
Gma03g01352 1007 Pfam Kinesin motor domain 78 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01352 1007 MobiDBLite consensus disorder prediction 15 51 - -
Gma03g01352 1007 ProSiteProfiles Kinesin motor domain profile. 72 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01352 1007 CDD KISc_CENP_E 72 391 - -
Gma03g01352 1007 Coils Coil 943 974 - -
Gma03g01352 1007 MobiDBLite consensus disorder prediction 569 609 - -
Gma03g01352 1007 Coils Coil 820 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01352 Gma-Chr3 39676494 39691819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01352 1 723 Miscellaneous Gene Families AT5G06670 68.033 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01352 K11498 - gmx:100787892 1894.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01352 03 39676494 39691819 Gma03g01352 03 39676494 39691819 ECH
Gma19g01416 19 43425759 43441646 Gma03g01352 03 39676494 39691819 GST
Gma03g01352 03 39676494 39691819 Gma02g01573 02 31662771 31679831 PCT
Gma02g01573 02 31662771 31679831 Gma03g01352 03 39676494 39691819 PCT