Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01345 ATGGAGGAAGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGAACTAGTCCACCGCCTCCTCTCCCAAAACCTCCCCCCAAATTCCCCTCCCCTAAACCCTAACTCCCCCGAATTCCGCAACTCCCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGCCTCACCCCCTCCGTCGCCCCCGACGCCGCCGCCATCGCCGACTCCATCAAGCGCCGCCTCGCTACCCACGGCCACTCCTCCGAAGCCCTCTCCTTCGCCGACCTCTTCTCCAAATTCTCCTCCAAAGCCCAAAGCGTCAACAACAAATTCGCCGTCATCTACCTCCTCAAAATCGTCTCCGAAGATCGCCACACCACCACCGCAACCACCACCCCTCTCCTCCCCAACCTCAGTTTCTCCGAACCTACCTCCAACAAAAAACCCTGGAACGACAACGGCGCCCTCCTCATCTCCAAGGACCCCGAGAACCGCCGCGACGTCGCGTTTCGCGAGTTCGTCGATCTAGTCAAGGAAGAAAACGAGGTGTCGGAAGAGGTTCTCGTCCAAGACGTGCTCTATGCTTGCCAAGGAGTGGATGGTAAGTTCGTGAAATTTGACGGCGAGAGTAAGCGTTATGTGATACCTGATTCAATTAGGGTTCCCCGAGCCACTAGGAGTATGGTTTACAATCTCTGTGAATTGGGGGTTTTGTTTAGAAACGTTAGCGGTTACATTTCGCTGAGTATGGATCGGTTTCCCAATGAAGATGTGGGAACTGTGGGCCAGGCTTTTTGCTCCGCTTTGCAGGACGAGCTTAGTGAGTATTATAAGCTGCTGGCGGTTCTTGAGGCTCAGGCTTCCAACCCGATTCCTTTGGTTTCGGAATCCGCGAGCTCCGGGAACTACCTTTCGCTCAGGAGGCTTGCGGTCTGGGTTGCTGAGCCCTTGGTGAAGATGAGGCTGATGGCTGATTTAGTTGAGAAGTGCAGGGTTTTGCGCGGCGGGGCGATGGCGGGGGCGATTCATTTGCACGCGCAGCATGGTGATCCGTTGGTTCATGAGTTCATGAGGAGGTTGCTGCAGAGGGTGTGTTCTTCGCTGTTTGAGATGGTGAGGAGGTGGGTTTTGGAAGGGGAGTTGGAGGATATCTTTGCGGAGTTTTTCATTGTTGGACAGCCTGTGAAGGCTGAGTCCCTCTGGAGAGAAGGGTATAGGCTCCATGATTCCATGCTTCCTTTGTTTATCTCACCTTCGCTTGCACAGAGGATATTGAGGACCGGGAAATCCATTAATTTTCTTCGCGTTTGTTGTGAGGATCATGGTTGGGCTGATGCTGCGACCGAGGTTGTTGCTGATCATGGAGCAACGGCGAGAAGAGGTGGTTTTGGATATGGAGAAACGGATACCCTTGAGTTTTTGGTGGATGAAGCTTCAAAGAGGATTGATAAGCATTTGTTGGATGTGATTTTCAAGAGGTACAAGTTCAAAGAACACTGTCTTGCAATTAAGCAGTATTTGTTGCTTGGGCAAGGTGATTTTGTGCAGTATCTGATGGATATCGTTGGGCCTGAACTTTCTGAGCCGGCTAACACTATAAGCTCTTTTAAACTTTCGGGATTGCTGGAAACTGCAATTCGGGCATCTAATGCTCAGTATGATGATCCTGAAATTTTGGATAGGCTCAGGGTTAAAATGATGCCACATGAAAGCGGTGATAGGGGCTGGGATGTATTTTCACTAGAATACGATGCTAGAGTTCCACTTGATACGGTGTTCACGGAATCTGTGATGGCAAGGTATTTAAGAATTTTTAATTTTCTGTGGAAGCTTAGACGAGTGGAACATGCGCTTACTGGAGCCTGGAAGACCATGAAGCCAAACTGCATTACCTCTAATTCCTTCACCAGATTGCAACATGCAGTAAAGATGCAGTTAGTTTCGACATTGAGGCGCTGTCAGGTTCTGTGGGTTGAAATCAATCACTTCATTTCAAACTTGCAATATTATATAATGTTTGAAGTGTTGGAGGTATCATGGTCAAATTTTTTGGCTGAGATGGAAGTAGCCAAGGATCTTGATGATCTACTTGCTGCTCATGAAAAATATCTGCATTCTATTGTAGAGAAATCTCTCCTTGGAGAGCTTTCCCAGTCTCTTTACAAGTCACTATTTGTAATTTTTGATCTTATATTACGTTTTCGGAGCCGTGCGGATCGGTTGTATGAAGGTATTCATGAGTTGCAAGCAAGATTCACAGAATCCTCCCTATCCTCTCGAGACAAGAATCAATCACGATCTCGAAAGCAACTAAGTGATAAATCTGCAGAACAAGGATCCTGGATTGCTGATGGGAGAAAAGCCCTAACACAACGAGCTGGTGAATTTCTACGAAATATGGAGCAAGATCTGGATGCAATTGCTAAGGAGTATTCATCATTGCAAGAGGGATTCATTTCTCAATTGCCTGTACAGCAGCATAATGGGTCATTAATTGACCATATAGGTAGTCACATTTTGTGA 2502 0.4816 MEEEEDQQKLPDLVKELVHRLLSQNLPPNSPPLNPNSPEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLATHGHSSEALSFADLFSKFSSKAQSVNNKFAVIYLLKIVSEDRHTTTATTTPLLPNLSFSEPTSNKKPWNDNGALLISKDPENRRDVAFREFVDLVKEENEVSEEVLVQDVLYACQGVDGKFVKFDGESKRYVIPDSIRVPRATRSMVYNLCELGVLFRNVSGYISLSMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAVLEAQASNPIPLVSESASSGNYLSLRRLAVWVAEPLVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGQPVKAESLWREGYRLHDSMLPLFISPSLAQRILRTGKSINFLRVCCEDHGWADAATEVVADHGATARRGGFGYGETDTLEFLVDEASKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPEILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEVSWSNFLAEMEVAKDLDDLLAAHEKYLHSIVEKSLLGELSQSLYKSLFVIFDLILRFRSRADRLYEGIHELQARFTESSLSSRDKNQSRSRKQLSDKSAEQGSWIADGRKALTQRAGEFLRNMEQDLDAIAKEYSSLQEGFISQLPVQQHNGSLIDHIGSHIL 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01345 833 Pfam Gamma tubulin complex component C-terminal 491 820 IPR040457 GO:0043015
Gma03g01345 833 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 32 820 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Gma03g01345 833 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 32 820 - -
Gma03g01345 833 Pfam Gamma tubulin complex component N-terminal 182 485 IPR041470 -
Gma03g01345 833 Gene3D - 490 817 IPR042241 -
Gma03g01345 833 Coils Coil 790 810 - -
Gma03g01345 833 Coils Coil 259 279 - -
Gma03g01345 833 MobiDBLite consensus disorder prediction 752 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01345 Gma-Chr3 39592636 39595523 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01345 K16570 - gmx:100784710 1593.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01345 03 39592636 39595523 Gma03g01345 03 39592636 39595523 ECH
Gma19g01409 19 43347525 43350652 Gma03g01345 03 39592636 39595523 GST