Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01340 ATGGCTGATGCCACCAAGTATGTTCCCATCGCTGGTACCAACGTCTCTTCCATTCTCAAAACCAGAAAAACGGTGGCTGCTGCATACTCTTTCATACTCGCCTTCGTCGCTTTCACTGTTTTCTTAGCCTTTTCCCCTTCTTCAAACGCTTCTTCACCTTGGTTCACCAACATATTCTCTCCCACATCCACCACCGACGGCTCCTACAAGCCTCAAATTCCTAACATTTTCTCTCTCCTTTTCCCAAACACTACTTCACCCTCCAATTCTTCTGATCCCCTGCATAACAACACTCACTCTTTTAGATCTACCAATGCCACTTCTTTATCTCCTTATCCAAAAACAGCCTTAGAATCTCAAACACTCAAACAAACCTCTTTAGAAAACAGAACCCAGACAACCTTGGTGAATTCAACCCAACATGCAGTTCCTGTTCCAACCACAAACCAGACCACGGATTCTCACGCGCCAAGTTTGGAGGTGAAGTCACCACCATTCCTTGCAAGTAAGGAACCGCCAGGTGCTGTAAAAAATCAGACTTTTAACTCTGATGAAGCTAAATCTGCGAGCACAAATCAAACTACAAATGCTACTGCAACTGCAACTGCAACCAATGTTTCAGTGAGTTTCCCTGTTCAGAATGTTCCAAATCTGAACACGAGTTCTAATTCTTCGGTGAAGGTGGATTTGGTGAAGGGTACTGTTGTGTCTAATGATAATTACACCGCTTCTCTGGCGAGGAAACAGAACAATGGGAAGGATCACGCTAAGGGGAACGATGAATCGATGGAGTCTCtgatgaagtgtgatttttttgatggagagtgggttaaggatgatgcatatcctctctataagccagattcttgctctttgattgatgaacagttcaattgtattaggaatggaaggcctgataaggattatcagaaatataagtggaagccaaagggttgcacccttccaagGTTGGATGCGCATCGAatgctgcaattgttgagagggaaacgactggtttttgttggcgattcgctcaataggaacatgtgggagtctttgatttgcatattgagaaatgctgtgaaaaataaacacaatgtttatgaagtaaatggaagAGTTAATTTCAGAGGCGAAGCCGCTTATTCATTTGTTTTCGAAGATTATCACTTCTCCGTGGAGCTTTTTGTGTCTCCATTCTTGGTTCAAGAAGGGGAAATGACTGATAAGAATGGGACAAAGAAGGAAACACTTCGTCTCGATTTGGTTGGTAAATCTTCATCTCAATATAAAGATGCAGATATTCTCGTCTTCAACACTGGCCACTGGTGGACTCATGATAAAACTTCTAAAGGGCAGGACTATTATCAAGAAGGTAACCATGTGTATTCCGAATTAAACGTTCTTGAGGCATTCCGAAGAGCTTTAACAACTTGGAGCAGGTGGGTTGATGCCAACATAAATCCATCCAAGACCACGGTCTTCTTCAGAGGCTATTCTGCATCCCACTTCAGTGGTGGACAATGGAATTCAGGTGGTCAATGTGATAGTGAAACTGATCCAATTGACAACGAGAAGTACCTAACCGAGTATCCAGATAAGATGAAGGTTTTGGAGAAGGTGCTAAAGAATATGAAAACCCGTGTGACTTACCAAAACATCACTAGAATGACGGATTTCCGGAAGGATGGTCACCCCTCCATATACAGGAAGCAAAATCTATCACCTGAGGAACTAAAATCACCTTTGAGATTCcaagactgcagccactggtgccttccgggtgttcctgatttatggaatgaaattctctacgctgaacttctGTTGAGAGAGTATCGGAATCAGCATGAGCAGAAGAAAGCATAG 1869 0.3467 MADATKYVPIAGTNVSSILKTRKTVAAAYSFILAFVAFTVFLAFSPSSNASSPWFTNIFSPTSTTDGSYKPQIPNIFSLLFPNTTSPSNSSDPLHNNTHSFRSTNATSLSPYPKTALESQTLKQTSLENRTQTTLVNSTQHAVPVPTTNQTTDSHAPSLEVKSPPFLASKEPPGAVKNQTFNSDEAKSASTNQTTNATATATATNVSVSFPVQNVPNLNTSSNSSVKVDLVKGTVVSNDNYTASLARKQNNGKDHAKGNDESMESLMKCDFFDGEWVKDDAYPLYKPDSCSLIDEQFNCIRNGRPDKDYQKYKWKPKGCTLPRLDAHRMLQLLRGKRLVFVGDSLNRNMWESLICILRNAVKNKHNVYEVNGRVNFRGEAAYSFVFEDYHFSVELFVSPFLVQEGEMTDKNGTKKETLRLDLVGKSSSQYKDADILVFNTGHWWTHDKTSKGQDYYQEGNHVYSELNVLEAFRRALTTWSRWVDANINPSKTTVFFRGYSASHFSGGQWNSGGQCDSETDPIDNEKYLTEYPDKMKVLEKVLKNMKTRVTYQNITRMTDFRKDGHPSIYRKQNLSPEELKSPLRFQDCSHWCLPGVPDLWNEILYAELLLREYRNQHEQKKA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01340 622 MobiDBLite consensus disorder prediction 87 112 - -
Gma03g01340 622 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 615 IPR029962 GO:0016413
Gma03g01340 622 MobiDBLite consensus disorder prediction 175 196 - -
Gma03g01340 622 MobiDBLite consensus disorder prediction 127 158 - -
Gma03g01340 622 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 14 615 - -
Gma03g01340 622 MobiDBLite consensus disorder prediction 127 196 - -
Gma03g01340 622 Pfam PMR5 N terminal Domain 268 319 IPR025846 -
Gma03g01340 622 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 321 606 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01340 Gma-Chr3 39564713 39567989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01340 - - gmx:100785240 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01340 03 39564713 39567989 Gma03g01340 03 39564713 39567989 ECH
Gma19g01405 19 43316146 43319388 Gma03g01340 03 39564713 39567989 GST
Gma03g01340 03 39564713 39567989 Gma02g01581 02 31954563 31957750 PCT
Gma02g01581 02 31954563 31957750 Gma03g01340 03 39564713 39567989 PCT