Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01319 ATGTTTAGCCCTTCGCATCTCAAAACCTTGTACCCTCTTCAACAAGCCTTCTCAGTAAAACCATCTTCAACCATAAGCTCCATGAAGCTAAAGAGAATCGTGCACACCCTCATAGTTTCCCACTTGTGCCGAATCATTCGTGCACTCTCCAAAGTCAAAGATGTTATGGTTGAGATTCTTAAAGAAAACTCAACCATGATCCACAAAAAGCACTACAACAACTACAGACGCAAGAATAAGATCATCCTAGGCTCCTTCAGGCTCCACTACAACTGGTGCTCCTCCAAATCCTCGCATGTGTTGCCGGTTCCCGAACCGGTTTACGCCACGTGCCGCGACTCGGGGGAGCCGCCGCGAGACGAAGAAGATTGCCCCTACCTAAGGTGGCTTGAGGAGAAGGTTGAAGTTGAAGGTGGTGGTGGTGATAATAGTAATAATAAGGGTGCAAGTGCAACAAATGATGAGCATGATGAAATGAACGAGATTGATGTGCTGGCGGAAATGTTCATTGCCAATTGCCACGAGAAGTTCAGGTTGGAAAAGCAAGAGTCTGATAGGAGGTTCCATGAAATGCTGGCTAGAAGCATGTGA 591 0.467 MFSPSHLKTLYPLQQAFSVKPSSTISSMKLKRIVHTLIVSHLCRIIRALSKVKDVMVEILKENSTMIHKKHYNNYRRKNKIILGSFRLHYNWCSSKSSHVLPVPEPVYATCRDSGEPPRDEEDCPYLRWLEEKVEVEGGGGDNSNNKGASATNDEHDEMNEIDVLAEMFIANCHEKFRLEKQESDRRFHEMLARSM 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01319 196 MobiDBLite consensus disorder prediction 136 155 - -
Gma03g01319 196 PANTHER EMB|CAB67623.1-RELATED 3 196 - -
Gma03g01319 196 PANTHER DUF761 DOMAIN PROTEIN 3 196 - -
Gma03g01319 196 Pfam Cotton fibre expressed protein 160 194 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01319 Gma-Chr3 39393940 39394530 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01319 - - gmx:100777411 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01319 03 39393940 39394530 Gma03g01319 03 39393940 39394530 ECH
Gma19g01384 19 43145302 43145874 Gma03g01319 03 39393940 39394530 GST