Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01310 ATGACGGAACCGACAGAGCCATCCACGTCATCTTCATTGGCGAGGGACCCAACCACCGTGGTTCACCCAAGGCGCGAGCCATTCGAGCACGGCCTCTTGCCAATCCCGCGCCTCATCTTCTCCGACCCGACGCAAACCCTAATCTCGTTGAAGCAGAAGCTTCTCGAGTTATCCTCTAACCAGCGAGTCGACTCGGCGGCAATCTCCGAGTCACTGCAGATCCCCATTGAGCACGCCAGGCTCGTCCTTGATACCCTCGCCTCGATTCTGCACTCCGACTCCGAACCTCTCGTCGCCGCCAAGCTCGAAGAAATCGATTCCGTCGGCGTCGACGTCCATGATCTGGTTTTGTTCCTCTACATTCAATCCTACAAGAGGCTCCTCCCGCGCACGCACAAGGACTCCGCCGCCGTCGCCGATGTCTGGCCTTCCACCTCCGCCTTCGACGGCTACTTGTCCGCTCTCTCGCCGCTTCAGCTCGTACGCAGCAACAGTCGGCGGTTTATGCCGTCCCAGGCTGATGAAGAGGCACATCAATTGTCGTATCTGCAAAAGCACTTGGCTAACATTGTGTCTCTTCTAGCAGAGCCTGTGGAGGGAGAAGGCGAAGAGTCCCTGGTTTTAACCATGGATAGATTTGAGCATCTTGGGTTCCTAATTCGGTTTGGTGATAAGGGATCAGAAGGAAATTCTTTTAGTCAATGTTCTCCTTTTTTTGCAAACTCAGACCCTGACATGCCTGCTGTTCCCGTTCCTGCCGCACAAGTTCATGATTGGCTTCTGCAGAATATAGTGTCTGCTTTGGAATATATTTCTGAACGGACTTCTTCAAAGGAAAATGGCCCAGCTAGTGCCTCTGATCAGGATGTTGCCATGACTGACGCAAGCACTGTCTCAGTTAAGGTCTCAACAGGTACTAGAGGGGCAAGTTTCATTGAAGGGATCTCTAAATCGTCATATGCTAAGCATGCATCTGACATTAAAGGTTCCTCCGTTAAGGTTCTAAATTGCCACGAGTCTGCCATCTACATCTTAGCACCATTGAGATATGCTACTGTCTATGGATGTTCAGATGCAACAATAGTTCTAGGAGCAGTTGGCAAGGCTGTGAGAGTTGAACACTGTGAACGAGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTGTTTTCTTTTTGGGGGTGAATCAGCAACCACTTATTGTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACTTTTTATGCCCAATTGGAGGAGCATATGAATGAAGTTAGAATTGTGCCCTCAGTGAACCGATGGAATGAACCCCTAGCATTGGGCATGGTTGATCCCCATGATTCATTATCTCATCCAGCTGGTGTCTCTGATGTTCAAACTGAGTCTGCTACACAGGTGGACCCTGAGCAGTTCACTAATTTTGTGATTCCAAGCTGGCTTGGAGGAGAGTCCACTGGGTTTAAAAAAGACAATCCATTCACGTTACCTGATGCTTATATGGCATCTCAGCATAAAAATCACAAAAATTTAGAGGAGATAAGGAAACTCTTACGAGAAGCATCTTTAGAAGAAAGTCGCAAACGAGAATTGTCATCTGCCCTCCATGTCTACTTCAAGGACTGGTTATATGCCTCGGGAAACATTCGTCAGCTTTATTGTCTACAAGGTGATTGA 1698 0.4823 MTEPTEPSTSSSLARDPTTVVHPRREPFEHGLLPIPRLIFSDPTQTLISLKQKLLELSSNQRVDSAAISESLQIPIEHARLVLDTLASILHSDSEPLVAAKLEEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANIVSLLAEPVEGEGEESLVLTMDRFEHLGFLIRFGDKGSEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNIVSALEYISERTSSKENGPASASDQDVAMTDASTVSVKVSTGTRGASFIEGISKSSYAKHASDIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYAQLEEHMNEVRIVPSVNRWNEPLALGMVDPHDSLSHPAGVSDVQTESATQVDPEQFTNFVIPSWLGGESTGFKKDNPFTLPDAYMASQHKNHKNLEEIRKLLREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01310 565 SMART carp 337 374 IPR006599 -
Gma03g01310 565 SMART carp 375 409 IPR006599 -
Gma03g01310 565 PANTHER BNAC04G02540D PROTEIN 14 565 - -
Gma03g01310 565 PANTHER UNCHARACTERIZED 14 565 IPR039589 -
Gma03g01310 565 MobiDBLite consensus disorder prediction 1 21 - -
Gma03g01310 565 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Gma03g01310 565 MobiDBLite consensus disorder prediction 1 17 - -
Gma03g01310 565 Gene3D - 309 477 IPR016098 -
Gma03g01310 565 ProSiteProfiles C-CAP/cofactor C-like domain profile. 282 435 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01310 Gma-Chr3 39281548 39290324 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01310 K16810 - gmx:100780410 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01310 03 39281548 39290324 Gma03g01310 03 39281548 39290324 ECH
Gma19g01372 19 43015993 43024520 Gma03g01310 03 39281548 39290324 GST