Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01309 ATGACGGAACCAACGGAGCCATGCACGTCATCTTCCTTGGCAAGGGACCCAACCACCGTGATCCACCCAAGGCGCGAGCCCTTCGAGCACGGCCTCTTGCCGATCCCGCGCCTCATCTTCTCCGACCCGGCGCAAACCCTAATTCCGTTGAAGCAGAAGCTTCTCGAGTCTTCCTCCAACCAGCGAGTCGACTCAGCGGCAATCTCCGAGTCACTTCAGATCTCCATTGAGCAAGCCAGGCTCGTCCTCGATACTCTTGCCTCGGTTCTGCACTCCGACGCCGAACCTCTCGTCGCCGCCAAGCTCGGAGAAATCGATTCCGTCGGCGTCGACGTCCATGATCTGGTTTTGTTCCTCTACATTCAATCCTACAAGAGGCTCCTCCCGCGCACGCACAAGGACTCCGCCGCCGTCGCCGATGTCTGGCCTTCCACCTCCGCCTTCGACGGCTACTTGTCCGCACTCTCGCCGCTTCAGCTTGTGCGCAGCAACAGCCGAAGGGGTATGCCATCGCAGGTTGATGAAGAGGCGCATCAGCTGTCGTATCTGCAAAAACATTTAGCTAACATTGTATCTCTTGTAGCACAGCCTGTGGAGGGAGAAGGCGAAGAATCTCTGGTTTTAACCATGGATAGATTTGAGCACCTTGGGTTTCTAATTCAGTTTGGTGATAAGGGATCTGAAGGAAATTCTTTTAGTCAATCTTCTCCCTTTTTTGCAAACTCAGACCCTGATATGCCTGCTGTTCCTGTTCCTGCTGCTCAAGTTCATGATTGGCTTCTACAGAATATAGCTGCTGCTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAGAATGGCCCAGCTAGTGCCTCTGATCAGGATGTTGCTATGACTGATGCATGCACTACCTCAGTTAACAAGGTCTCAACAAGTACTAGAAGTGCAAGTTTCATTGAAGGGATCTCCAAATCGTCATATGTGAAGCATGCATCTGACATTAAAGGTTCCTCTGTTAAGGTTCTAAATTGCCATGAGTCTGCCATATACATCTTAGCACCTTTGAGATATGCAACTGTCTATGGATGTTCAGATGCAACAGTAGTTATTGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGCGAACGAGTTCATGTAATCGTAGCCGCAAAGCGTATTTGTATTGCTAATTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTCTTGGTGATAACCATAAACTGCAGGTGGCTCCCTATAATACATTTTACTCCCAATTGGAAGAGCATATGAATGAAGTTGGAATTGTGCCCACAGTTAACCGATGGGATGAGCCTCTAGCATTGGGCATGGTTGATCCCCATGATTCATTATCTCATCCAGCGGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACACGTGTGGACCCTGATCAGTTCACTAATTTTGTGATTCCAAATTGGTTTGGAGCAGAGTCCACAGGGGCTACAAAAGGCAACCCATTCATGTTACCAGATGCCTATATGGCATCTCAGCATAAAAATCAAAAAAATTTAGGGGAGATAAGGCAACTCTTACGAGAAGCACCTTTAGAAGAAAGTCGCAAACGAGAATTGTCATCTGCACTTCATGTCTACTTCAAGGACTGGTTATATGCTTCAGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGA 1701 0.478 MTEPTEPCTSSSLARDPTTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLESSSNQRVDSAAISESLQISIEQARLVLDTLASVLHSDAEPLVAAKLGEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRGMPSQVDEEAHQLSYLQKHLANIVSLVAQPVEGEGEESLVLTMDRFEHLGFLIQFGDKGSEGNSFSQSSPFFANSDPDMPAVPVPAAQVHDWLLQNIAAALEYISERTSSKENGPASASDQDVAMTDACTTSVNKVSTSTRSASFIEGISKSSYVKHASDIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATVVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLILGDNHKLQVAPYNTFYSQLEEHMNEVGIVPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNWFGAESTGATKGNPFMLPDAYMASQHKNQKNLGEIRQLLREAPLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01309 566 Gene3D - 310 473 IPR016098 -
Gma03g01309 566 SMART carp 376 410 IPR006599 -
Gma03g01309 566 SMART carp 338 375 IPR006599 -
Gma03g01309 566 PANTHER UNCHARACTERIZED 15 566 IPR039589 -
Gma03g01309 566 Pfam Tubulin binding cofactor C 330 445 IPR012945 -
Gma03g01309 566 PANTHER BNAC04G02540D PROTEIN 15 566 - -
Gma03g01309 566 ProSiteProfiles C-CAP/cofactor C-like domain profile. 300 436 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01309 Gma-Chr3 39272685 39280187 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01309 K16810 - gmx:100819271 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01371 19 43005641 43015089 Gma03g01309 03 39272685 39280187 GST