Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01290 ATGGCTATTGCAGCAGCGGCCGTGGTGGTACCATTGGGCCTGCTCTTCTTCGCCTCCGGCCTCCTTGTTAATCTCATTCAGGCAATATGCTATGTCGTCGTAAGGCCGGTGTCGAAAAGTTTGTACAGAAGGATCAACCGGGTAGTAGCAGAGCTCTTGTGGCTGGAGCTTGTATGGCTTATTGATTGGTGGGCAGGAGTTAAGGTCCAAATATTCACAGATCATGAAACCTTTCGTTTAATGGGTAAAGAGCATGCACTTGTGATAAGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGTTCAGGTTGTCTTGGCAGCACTCTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTAAAGTCAGGCATCCAGCGACTGAGTGATTTCCCTCTTCCCTTTTGGCTAGCTCTCTTTGTAGAAGGAACGCGTTTTACACAGGCCAAACTATTAGCTGCTCAGGAATATGCCACTTCCACTGGATTGCCTGTTCCTAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTAGCCATCCCTAAGAGTTCCCCTGCTCCTACAATGCTAAGACTCTTCAAGGGACAACCTTCAGTGGTGCATGTTCATATCAAGAGGCATTTGATGAAGGAACTGCCAGATACAGATGAGGCTGTTGCTCAATGGTGTCGAGATATATTTGTGGCCAAGGATGCTTTGTTAGACAAACATATGGCTGAGGGTACTTTTAGTGATCAAGAGCTGCAGGATACTGGTCGACCAATAAAGTCTCTTCTGGTAGTTATATCTTGGGCGTGTCTGGTTGTTGCGGGGTCTGTAAAGTTCCTGCAATGGTCTTCGTTACTCTCTTCCTGGAAGGGTGTTGCATTTTCAGCTTTTGGTTTGGCAGTTGTTACTGCACTTATGCAAATTCTGATTCAATTCTCACAGTCAGAGCGTTCAAACCCGGCCAAGATCGTGCCTGCAAAGTCAAAAAACAAGGGGTCTTGA 1134 0.4541 MAIAAAAVVVPLGLLFFASGLLVNLIQAICYVVVRPVSKSLYRRINRVVAELLWLELVWLIDWWAGVKVQIFTDHETFRLMGKEHALVISNHRSDIDWLVGWVSAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGIQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLFKGQPSVVHVHIKRHLMKELPDTDEAVAQWCRDIFVAKDALLDKHMAEGTFSDQELQDTGRPIKSLLVVISWACLVVAGSVKFLQWSSLLSSWKGVAFSAFGLAVVTALMQILIQFSQSERSNPAKIVPAKSKNKGS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01290 377 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 373 - -
Gma03g01290 377 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 44 283 - -
Gma03g01290 377 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 373 - -
Gma03g01290 377 CDD LPLAT_LCLAT1-like 62 253 - -
Gma03g01290 377 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Gma03g01290 377 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Gma03g01290 377 SMART plsc_2 86 208 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01290 Gma-Chr3 38994426 39001698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01290 3 375 Miscellaneous Gene Families AT3G57650 76.944 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01290 K13523 - gmx:100812696 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01290 03 38994426 39001698 Gma03g01290 03 38994426 39001698 ECH
Gma19g01344 19 42709425 42719924 Gma03g01290 03 38994426 39001698 GST
Gma03g01290 03 38994426 39001698 Gma02g01699 02 36201852 36209268 PCT
Gma02g01699 02 36201852 36209268 Gma03g01290 03 38994426 39001698 PCT