Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01254 ATGTCAGGGCTGAAGGAATTGCTGAAGAAAGGGTTAGGTTTAGGCGACATGGCGTTCAACGCCGGCGGCGGAGCCATAACCTGGTTCCCCGGCCACATGGCCGCCGCTACACGTGCCATCCGCCACCGCCTCAAACTCGCTGACCTCGTCATCGAAGTTCGCGACGCTCGCATTCCCCTCTCCTCCGCCAACGCCGACCTCCAGCCACACCTCTCCGCTAAACGACGCGTCGTCGCACTCAATAAAAAAGACCTCGCCAACCCTAACATCATGCATAAATGGACGCATTATTTTGAGACGTGTAATCAGAATTGCGTTGCGATCAACGCGCACAGCAAGAGTTCCGTGAAGAAGCTTCTGGAGGTGGTGGAGTTCAAGTTGAAGGAAGTGATTTGCAAGGAGCCGACGCTGCTTGTGATGGTGGTTGGTGTTCCCAACGTTGGCAAGTCTGCGCTGATTAACTCTATTCATCAAATTGCCAAGTCTCGCTTTCCTGTGCAGGAGAAGATGAAGCGCGCTGCTGTGGGTCCGCTACCTGGTGTTACTCAAGACATTGCTGGATTCAAGATAGCACATAAACCAAGCATATATGTCCTAGATACCCCAGGGGTTCTGGTTCCAAGTATCTCAGACATAGAGACAGGGTTAAAACTGGCTCTGGCAGGGTCTGTCAAAGATTCAGTAGTGGGTGAGGAGCGTATTGTTCAATACTTATTGGCAGTTTTGAATACCCGGGGGACTCCACTTCACTGGAAGCACCTAAATAATAGGAGAATAGATGGAATTGAATATGAAGCTGAGGAAAATCATGAATATAGTCTGAAAAATCTTAAGCCAAAGAGAAGAAATCTGCCAAATAGATCTGATTTGGTCTATGTTGAGGATCTTGTAATGCAAGTTCAGCGTGCACTCTATTCAAGTCTATCAGAATTCAATGGGAACGTAGAAGATGAGAGTGACCTGGAGAGCCTTATTGACCTGCAATTTAGTGCACTACAGAAGGCATTGAAGATACCTCACAAGGCTTCAGAAGCGCGGTTAATGGTATCCAAGAAGTTCCTTACTCTATTCAGGACCGGTAAGCTTGGACCTTTCATTCTAGATGATGTCCCGGATGTCAAGCCTGTGTCATAA 1134 0.4815 MSGLKELLKKGLGLGDMAFNAGGGAITWFPGHMAAATRAIRHRLKLADLVIEVRDARIPLSSANADLQPHLSAKRRVVALNKKDLANPNIMHKWTHYFETCNQNCVAINAHSKSSVKKLLEVVEFKLKEVICKEPTLLVMVVGVPNVGKSALINSIHQIAKSRFPVQEKMKRAAVGPLPGVTQDIAGFKIAHKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIVQYLLAVLNTRGTPLHWKHLNNRRIDGIEYEAEENHEYSLKNLKPKRRNLPNRSDLVYVEDLVMQVQRALYSSLSEFNGNVEDESDLESLIDLQFSALQKALKIPHKASEARLMVSKKFLTLFRTGKLGPFILDDVPDVKPVS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01254 377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 219 IPR027417 -
Gma03g01254 377 Pfam 50S ribosome-binding GTPase 139 245 IPR006073 GO:0005525
Gma03g01254 377 PANTHER SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE 19 373 - -
Gma03g01254 377 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 19 373 - -
Gma03g01254 377 Gene3D - 210 290 IPR023179 -
Gma03g01254 377 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 36 207 IPR030378 GO:0005525
Gma03g01254 377 Gene3D - 26 205 IPR027417 -
Gma03g01254 377 CDD YlqF 28 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01254 Gma-Chr3 38471917 38476522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01254 K19828 - gmx:100801130 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01254 03 38471917 38476522 Gma03g01254 03 38471917 38476522 ECH
Gma19g01303 19 42264687 42269573 Gma03g01254 03 38471917 38476522 GST