Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01239 ATGTCGTCATCCGCGGCGGTGCATCTCCAATCTCCGATCAACACCTCCTCTGACGCGCCGCCGCCGCCGCCGCCGCATTCTCCGTTCCTCCATTTCAATGCCGACTGCGTAAACCCTTCCGCCGCACGCACGAGGTCGAGGCCGAGGCTCGCCAAGCTGAGGAAGCAGTCTGCTTCGCAGCAGGCCCGGTCACGGAGCAGAACCGCCACCGGCGACGACGGCTCCGGCGCCGGCTTCAATCCGTTTCGCTCCGATCATCAGGTAAACGGTAATGTTAACAGTAGTGGAGTAGAGAGTGGTTCCGATGGTTTTGTGTTTGGGGCTGGGAAGGGCGATTCTGATTCCGCTAGGGATTTGAAGGGGCCGAGTGAGGGAGAAATTGGGGAGGGTGGCGGTGGTGTGGAATTTGTGTTTAGTGCTAAAAAACGGAGTGATGAAGATGAATTGAAAAAGAAAAATGAAAATGTTACAGAGGCGGTTTCTGGTGTTGAGAGGAAGGTGGTGTCGAATTCGGAGGGGGAGCAGGGGGAATTGAATGGTAGGGAGTTTGTTTTTGGTGCTTGTAGAAACAATTTGGATTCTGGTTTAAATACAGAAAAGGGGAAATCTGGTGTACGTGTGGGGGATTCGGGGTTTGATAGTGGTGGGGTGAGGGAATGTGAGACTGAATTTGAGTGTGGAAAGCGTGATAGTGTTAGTAATGTGGAGAAGCTGGAGCCTGTTGGCCGTGTGTGGAATTCGGAACGTGGAATGGGTGCTTTTGGTGTTAAGGTGGGAGTGAATGGTAATAGTGATACAGGTGCTGATCGGTGTGATCATTTGGGTGATGGTGGTAAGTGCGAGAATCGATATGGCAGTCTTAATGGTATTGCTGCTGCTTATAGTGACGTTCCAGTGATGCGCAATTTATCAGATGAGATGGAGAAACTGAACATCAAACATTCTGAGGGTGCTGATATTGCCAGAGATTCGGTGAATTCACATGCAAATGGTAGTGCTGGTTTTGTGTTTGGAGCAAGTGACAAGGCTTTTGGCTATTCTAGTGTTAGTTCAAGAACTGATGCCAGTGGTCAGCAGTCTTGTGCTCAGGCTACTTTTGAGAATATTGGTGGGCAATTTGCTAAAGCGGGTGGATTAAAAGGTGTTCAAAATGGAACTGCTGGTGGTGTTGCCTGTGGTTCTGCAGGAATACGTTGCTCTAAGCCATCCACTAGTCAGGAAACCATCAGAGATTTCCAGTGTGGCAAAATTCCAGAATGTAATGTGTCTGAAGATTCTAAAGTGAATGGAGCTGCAGCATCGTTTTCCTTTTCATCATTTGGTTTTGATTCCCATCCAAATAACCATGCTTCCATGGGCCATTCCTCAAGTGCAGATAATGATAAGGATGGAAATTGTTTTGCAAGTACTCCAGAGGCTTCCAAAGAGTCTTTTGCGGACTTCAAACCCCCAACATGGGATCCTTCTTGTTTCAAAGAAAATTTATTTCCTAAGTTAAATAAAAAAGTTGAATCCACAGCGAAGGACCGATCTTGTAAGGAAAAAGGATCAAAATGTATGAGGAGAAAATTGAAGCCGCATTCTGTAAATAAGAAACAGTCAGAGCTGGACCATTTGTTGAAGGAAAATGGTTCACAGAAAACCCCTGATTCTTCTGGTATCCACTCACCCATGGATTTTTCTCCTTATCAGGAAACAACAGCAAGTGATCATGCGAAAGCTTCTGAAAAATTAAATGATCTGCATTCAACAATTCCTACTGATCAATGCGGTAGTGTagcaggtgcttcagcaggtgcttctgcagatgctGGGTTTGACTTCACCCCAAACACTGAAAAGCAAAAGGATGATGAATTTCGTTTTGTTCATGGTGTGAATGATTCAAAGGGGAAAGGTTTTGCATTTTTTGCTTCATCAGCTGTGGAGGGTACTCCATTAAAGCGTCAACAGAAGAAGAAATTTAGGAGAAAAATGGGGTGCGACTCTTTTGTTATCTCTCCTCGTGTGAATGGAAACTTTGTATCTTCTGTACAATTTTCTCCCCATAACACTGCCAACATGTCATCACATTCTGACGTACAATTCAAGGAATTGGATGTTGCATCATCGGATACAATTCCAGCAGCCTGCGACACATGGAGACTCAGGGGGAACCAAGCTCATAAAGATGGGGATCTTTCTAAAGCCGAGGACTTCTACTCTCGAGGAATAAATTCTGTCCCTTCAAGTGAAAGATCAGGATGCTGGGCTAAGCCTCTTTTACTGTGCTATAGTAACCGTGCAGCAACACGGATGAGTCTTGGAAGGATCAGAGAAGCTCTAGAGGATTGCATGATGGCTACAGCTCTGGACCCCTCCTTTATGAAAGTACAGATGAGAACTGCTAACTGTCACCTTTTGCTAGGGGAAGTAGAAAATGCTCAGCAGTGTTTTAATAAGTGCATGGAATCAGGTAATGCTGTTTGTTTGGATCGGAGGGTTATAGTTGAAGCAGCTGAAGGTTTACAGAAGGCTCAGGAAGTGGTCAAGTGTATAAATAATGCTGCTGAACTTTTAAAAGAGAGGACTTCTGATGCAGCTGTTACTGCTTTAGAACTAGCTTCTAAGGCATTGTCAATAAGTTTATACTCAGAAAAATTGCTTCAAATGAAGGCAGAGGCTCTATGTTTGCTACAAAAGTATGATGCCACAATTCAGCTTTGTGAACAGAGTCAGCATCTTGCAGAAAAGAATTTTGTCTTGACAAACAATGCAGAGAATTCTGATAGTTCCTTATGTGATAGTTACTCAAGTGTAAAATTGTGGAGGTGGTCATTGAAATCCAAGTGTTACTTTCGTTTGGGAAGGCTTGAAGCATCACTTAATGTTCTCGAGAAATTACAGCAAGTTGTGTCTGTCAATGACAAGTGTGTGATTGATAACATTGAAGACTTGCTGACATTAGCTTCTACAATACGAGAACTTCTGAACCACAAGAGGGCTGGAAATGAAAACTTTAAATCTGGAAAGTATATGGAAGCTGTTGAGAATTACACTGCTGCTTTATCTTGCAATGTTAAATCACGTCCTTTTATGGCAATTTGTTTCTGCAACCGTGCTGCAGCTCATCAATCTTTAGGCCAAATTGCCGATGCCATTGCGGACTGCAGTGTGGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCTTGCATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAAGAGACTTATAGCTGTCCTTGAAACTCAATCCAATGAAAGAGCCAAACAATCTGACTCACCCAGTGGATCTAATGGTGTGAAAGAATTAAGGCAAGCTCATCAACGTCTGCTTTCAGTGGAAGATCAAGCCAAAAAGGGAACACCCTTGGATGTTTACCTCATTTTAGGAATCAAATCAGCTGATACAGCAACAGATATCAAGAAGGCATACCACAAGGCAGCTCTCAGACATCATCCAGACAAGGCTGGTCAGTTGTTGGCTAGAAGTGAAGTTGGAGATGAAGGCCAACTTTGGAAGGAAATTTCACAGGAGGTGTACAAGGATGCTGATAAGCTTTTCAAAATGATCGGAGAAGCATATGCTGTGCTTTCAGACCCAGCCAAGCGCTCGGAGTATGATTTGGAAGAGGAGATAAGGAAAGCTTCTAAGTTATGTAACAGAGGTGGCACAAGCAGGagatcttcagatgcttatgggtgtggaagatcttcagatgcAGGATGGATACTCATGTCATGGGCATCGAGAATTGAGATTCTTTTGCCTGGTGAAGGCCATGATTGA 3819 0.4328 MSSSAAVHLQSPINTSSDAPPPPPPHSPFLHFNADCVNPSAARTRSRPRLAKLRKQSASQQARSRSRTATGDDGSGAGFNPFRSDHQVNGNVNSSGVESGSDGFVFGAGKGDSDSARDLKGPSEGEIGEGGGGVEFVFSAKKRSDEDELKKKNENVTEAVSGVERKVVSNSEGEQGELNGREFVFGACRNNLDSGLNTEKGKSGVRVGDSGFDSGGVRECETEFECGKRDSVSNVEKLEPVGRVWNSERGMGAFGVKVGVNGNSDTGADRCDHLGDGGKCENRYGSLNGIAAAYSDVPVMRNLSDEMEKLNIKHSEGADIARDSVNSHANGSAGFVFGASDKAFGYSSVSSRTDASGQQSCAQATFENIGGQFAKAGGLKGVQNGTAGGVACGSAGIRCSKPSTSQETIRDFQCGKIPECNVSEDSKVNGAAASFSFSSFGFDSHPNNHASMGHSSSADNDKDGNCFASTPEASKESFADFKPPTWDPSCFKENLFPKLNKKVESTAKDRSCKEKGSKCMRRKLKPHSVNKKQSELDHLLKENGSQKTPDSSGIHSPMDFSPYQETTASDHAKASEKLNDLHSTIPTDQCGSVAGASAGASADAGFDFTPNTEKQKDDEFRFVHGVNDSKGKGFAFFASSAVEGTPLKRQQKKKFRRKMGCDSFVISPRVNGNFVSSVQFSPHNTANMSSHSDVQFKELDVASSDTIPAACDTWRLRGNQAHKDGDLSKAEDFYSRGINSVPSSERSGCWAKPLLLCYSNRAATRMSLGRIREALEDCMMATALDPSFMKVQMRTANCHLLLGEVENAQQCFNKCMESGNAVCLDRRVIVEAAEGLQKAQEVVKCINNAAELLKERTSDAAVTALELASKALSISLYSEKLLQMKAEALCLLQKYDATIQLCEQSQHLAEKNFVLTNNAENSDSSLCDSYSSVKLWRWSLKSKCYFRLGRLEASLNVLEKLQQVVSVNDKCVIDNIEDLLTLASTIRELLNHKRAGNENFKSGKYMEAVENYTAALSCNVKSRPFMAICFCNRAAAHQSLGQIADAIADCSVAIALDGNYAKAISRRATLHEMVRDYEQAACDLKRLIAVLETQSNERAKQSDSPSGSNGVKELRQAHQRLLSVEDQAKKGTPLDVYLILGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSEVGDEGQLWKEISQEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEEIRKASKLCNRGGTSRRSSDAYGCGRSSDAGWILMSWASRIEILLPGEGHD 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01239 1272 MobiDBLite consensus disorder prediction 542 575 - -
Gma03g01239 1272 Coils Coil 146 166 - -
Gma03g01239 1272 MobiDBLite consensus disorder prediction 1 15 - -
Gma03g01239 1272 PRINTS DnaJ domain signature 1137 1155 IPR001623 -
Gma03g01239 1272 PRINTS DnaJ domain signature 1155 1170 IPR001623 -
Gma03g01239 1272 PRINTS DnaJ domain signature 1193 1213 IPR001623 -
Gma03g01239 1272 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 16 1244 - -
Gma03g01239 1272 Gene3D Tetratricopeptide repeat domain 988 1104 IPR011990 GO:0005515
Gma03g01239 1272 Gene3D Tetratricopeptide repeat domain 710 832 IPR011990 GO:0005515
Gma03g01239 1272 MobiDBLite consensus disorder prediction 82 100 - -
Gma03g01239 1272 MobiDBLite consensus disorder prediction 1 134 - -
Gma03g01239 1272 SUPERFAMILY Chaperone J-domain 1095 1217 IPR036869 -
Gma03g01239 1272 MobiDBLite consensus disorder prediction 450 464 - -
Gma03g01239 1272 Gene3D DnaJ domain 1105 1236 IPR036869 -
Gma03g01239 1272 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 16 1244 - -
Gma03g01239 1272 ProSiteProfiles dnaJ domain profile. 1135 1221 IPR001623 -
Gma03g01239 1272 SMART tpr_5 879 912 IPR019734 GO:0005515
Gma03g01239 1272 SMART tpr_5 1027 1060 IPR019734 GO:0005515
Gma03g01239 1272 SMART tpr_5 711 744 IPR019734 GO:0005515
Gma03g01239 1272 SMART tpr_5 755 788 IPR019734 GO:0005515
Gma03g01239 1272 SMART tpr_5 989 1022 IPR019734 GO:0005515
Gma03g01239 1272 SMART tpr_5 789 822 IPR019734 GO:0005515
Gma03g01239 1272 SMART tpr_5 1061 1094 IPR019734 GO:0005515
Gma03g01239 1272 SMART tpr_5 935 968 IPR019734 GO:0005515
Gma03g01239 1272 MobiDBLite consensus disorder prediction 545 569 - -
Gma03g01239 1272 MobiDBLite consensus disorder prediction 53 73 - -
Gma03g01239 1272 Coils Coil 836 856 - -
Gma03g01239 1272 SUPERFAMILY TPR-like 708 913 IPR011990 GO:0005515
Gma03g01239 1272 ProSitePatterns Nt-dnaJ domain signature. 1198 1217 IPR018253 -
Gma03g01239 1272 CDD DnaJ 1135 1210 IPR001623 -
Gma03g01239 1272 MobiDBLite consensus disorder prediction 450 470 - -
Gma03g01239 1272 Pfam DnaJ domain 1135 1218 IPR001623 -
Gma03g01239 1272 SMART dnaj_3 1134 1213 IPR001623 -
Gma03g01239 1272 SUPERFAMILY TPR-like 992 1089 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01239 Gma-Chr3 38294305 38306450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01239 K09527 - gmx:100809278 2416.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01289 19 42010547 42019266 Gma03g01239 03 38294305 38306450 GST