Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01220 ATGGCCATTGACAATCCATTGAATGATAAAGATTGTCACAAGTACACAACTAATATGTGGCCACAAGGGAATGACCAATTCAGTGAAAGTGTGAATTCATATGCAAATGAAGTGGTAGAACTGGATTATCTTGTTAAGAGAATGGCGTTTCAGAGCTATGGATTGGACAATAAGAAATGTAACTCTTTGCTTGAATCAACTGATTATGTTCTCAGATGCTACAAATACAGAACACCTAAGAAGGGAGAGACCAACTTAGGAGTGCGTCCTCATACAGATTCAGGATTCCTAACTATATTGAATCAGAAGTTAAATAGCTTAAAAATTCAATTGAAGGATGGAGAGTGGTTCAAGGTTGATGCCTCACCCAACATGTTAGCTGTCTTGGCTAGTGATGCATTCATGGTAGTATGGAGTAATGACAGGATACGGGGATGTGTACACCAAGTATTCATGAATTCAAAGGTAGACAGATACTGTTTGGCGCTACTTTCATATGCTGGAAAGGTGATGGAACCAGAGGAAAAATTAGAGGATGAGAAACATCCTCTTCGTTATAAACCATTTGATCATTATGGATATCTTCGTTTCTTCCTCACAGAAGAAGCTGTAAAATCTGCTTTTAGGATCAAGGATGAGGACACGAGGGTTGTACTTGCACTGCACGCACGCCATCCACAACTGAACCCTTTTTCTCTTCTTCGCTCCGCTTCCACTAAAAAGCTCGCACTCTCACTATCAGTCTCTGCCACCACAACAATGGGTGCTTCTCTTTCTCCCAATGAGGCCAACCTCTTCAAGCTTATTGTTCTCTTCTGCAAGTTAGAGCAGGATTGGAAGTTCCCGAACTCGCACATTGAGTTTGTTGCATTCTCTCTCTGTTCCTTTTTTTTTTTTCTCTTTTTCCTTGCGACTATGGGAAGCAGGAATGAAGTGTGA 939 0.4089 MAIDNPLNDKDCHKYTTNMWPQGNDQFSESVNSYANEVVELDYLVKRMAFQSYGLDNKKCNSLLESTDYVLRCYKYRTPKKGETNLGVRPHTDSGFLTILNQKLNSLKIQLKDGEWFKVDASPNMLAVLASDAFMVVWSNDRIRGCVHQVFMNSKVDRYCLALLSYAGKVMEPEEKLEDEKHPLRYKPFDHYGYLRFFLTEEAVKSAFRIKDEDTRVVLALHARHPQLNPFSLLRSASTKKLALSLSVSATTTMGASLSPNEANLFKLIVLFCKLEQDWKFPNSHIEFVAFSLCSFFFFLFFLATMGSRNEV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01220 312 Gene3D - 4 221 IPR027443 -
Gma03g01220 312 Pfam 2OG-Fe(II) oxygenase superfamily 76 163 IPR044861 -
Gma03g01220 312 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 211 - -
Gma03g01220 312 SUPERFAMILY Clavaminate synthase-like 13 201 - -
Gma03g01220 312 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01220 Gma-Chr3 38056132 38059044 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01220 34 210 Glycosyltransferase AT5G59530 26.203 8.00e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01220 - - gmx:100792845 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01274 19 41841069 41843311 Gma03g01220 03 38056132 38059044 GST