Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01206 ATGTTTTCTTCTGCAATTTCTCCGAAGCCCTTCCTTCGGTCCCTCGTCATTGATCGTTACGCTCAGAGCACAACTACTGCAACCAGGTGTGAGTGCTTGGGGTTTAACAAGTCAGAAAATTTCAGTACCAAGAGAGAGTTGTGTGCTGAGGGGTTCAAGCTGAATTGCTTGGTTGAAAATAGAGAGATGGATGTGGAGTCATCATCATCATCATCTTTGGTGGATGATGCTTCCTTGAGCTTAAGTGAAGAGGATTTAGGGGAGCCTAGTATTTCAACATTGGTGATGAATTTCGAGAGTAAGTTCGATCCTTTTGGAGCAATTAGTACCCCTCTTTACCAAACGGCTACTTTTAAGCAGCCTTCTGCAATAGAAAACGGCCCCTATGACTATACCAGAAGTGGAAATCCTACACGAGATGCTTTAGAAAGTTTACTAGCAAAGCTTGATAAAGCAGATAGAGCCCTGTGCTTCACCAGTGGAATGGCTGCTTTGAGTGCTGTTGTTCGTCTTGTTGGAACTGGCGAGGAAATTGTCGCCGGAGATGATGTATATGGTGGCTCAGATAGGTTGCTGTCTCAAGTGGTTCCAAGGACTGGAATTGTGGTGAAGCGGGCAAATACATGTGATCTAAATGAGGTTGCAGCAGCCATTGGACCCAAGACTAAGCTTGTGTGGCTTGAGAGTCCAACCAATCCTCGGCTACAAATTTCTGATATTCAAAAAATATCAGAGATAGCTCATTCACATGGTGCTCTTGTGTTAGTGGACAATAGTATAATGTCACCTGTGTTGTCTCGGCCATTGGAACTTGGAGCAGATATTGTCATGCACTCTGCTACAAAATTTATTGCTGGACATAGTGACATTATGGCTGGTGTGCTTGCTGTGAAGGGTGAAAAGTTGGGAAAGGAATTGTATTTCTTGCAAAATGCAGAGGGTTCAGGCTTAGCACCATTTGACTGTTGGCTTTGTTTGCGAGGAATCAAGACAATGGCCCTGCGAATTGAAAAACAACAGGATAATGCACAGAAGATTGCTGAGTTCCTTGCCTCCCATCCTCGAGTGAAGAAAGTGAATTATGCTGGCTTGCCTGGTCATCCTGGTCGTGATTTACACTATTCTCAGGCAAAGGGTGCAGGATCTGTGCTTAGCTTCTTGACTGGTTCATTGGAACTTTCAAAGCATATTGTTGAAACTACCAAATACTTCAGTATAACCGTCAGCTTTGGGAGTGTGAAGTCCCTTATTAGCATGCCATGCTTTATGTCACATGCAAGCATACCTGCTGCAGTTCGTGAGGCCAGAGGTTTAACTGAAGATCTTGTACGTATATCTGTGGGAATTGAGGATGTGAATGATCTCATTGCTGATCTTGACAATGCACTTAGAACAGGGCCTCTTTAA 1407 0.4392 MFSSAISPKPFLRSLVIDRYAQSTTTATRCECLGFNKSENFSTKRELCAEGFKLNCLVENREMDVESSSSSSLVDDASLSLSEEDLGEPSISTLVMNFESKFDPFGAISTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALSAVVRLVGTGEEIVAGDDVYGGSDRLLSQVVPRTGIVVKRANTCDLNEVAAAIGPKTKLVWLESPTNPRLQISDIQKISEIAHSHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDIMAGVLAVKGEKLGKELYFLQNAEGSGLAPFDCWLCLRGIKTMALRIEKQQDNAQKIAEFLASHPRVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLELSKHIVETTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLVRISVGIEDVNDLIADLDNALRTGPL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01206 468 Pfam Cys/Met metabolism PLP-dependent enzyme 93 463 IPR000277 GO:0019346|GO:0030170
Gma03g01206 468 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 274 288 IPR000277 GO:0019346|GO:0030170
Gma03g01206 468 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 33 468 IPR000277 GO:0019346|GO:0030170
Gma03g01206 468 SUPERFAMILY PLP-dependent transferases 103 464 IPR015424 -
Gma03g01206 468 Gene3D Aspartate Aminotransferase, domain 1 332 465 IPR015422 GO:0003824
Gma03g01206 468 CDD CGS_like 106 464 IPR000277 GO:0019346|GO:0030170
Gma03g01206 468 Gene3D - 90 331 IPR015421 GO:0003824
Gma03g01206 468 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 92 465 IPR006238 GO:0004121|GO:0071266
Gma03g01206 468 PANTHER BNAC04G24570D PROTEIN 33 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01206 Gma-Chr3 37849154 37855341 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01206 K01760 - gmx:100786470 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01261 19 41639338 41646157 Gma03g01206 03 37849154 37855341 GST