Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01203 ATGGACGCCAAGTTCGGAAGCCTCTTCGAATCCATCGGAAACTTCTTCACCGGCGGTGAACAGATCCCGTGGTGTGACCGTGACGTCATCGCTGGCTGTGAGAGAGAAGTTGCAGAGGCTGCTAATGGTGACTCTGAGGAGCGGAAGAATGAGAGTATAATGAGGCTGTCATGGGCTCTTGTTCATTCAAGGCAAAAGGAAGATATTCAGCGCGGGATAGCCATGCTTGAAACTTCCTTGGGCAATGATAAAAGTCCTTTGCATCAAAGAGAGAAGCTTTATCTTCTGGCTGTTGGTTACTATAGAAGTAATGACTATGGAAGGAGCCGGCAGCTTGTGGAGCAATGTTTGGAGATTGCACCTGATTGGAGGCAGGCACTATCCCTTAAGAAAATAGTTGAAGATCGAATTGCTAAAGATGGTGTAATAGGAATTGGCATCACTGCAACAGCTGTGGGACTTATAGTTGGTGGCATTGCTACGGCACTGGCCAGGAGGAATTGA 504 0.4762 MDAKFGSLFESIGNFFTGGEQIPWCDRDVIAGCEREVAEAANGDSEERKNESIMRLSWALVHSRQKEDIQRGIAMLETSLGNDKSPLHQREKLYLLAVGYYRSNDYGRSRQLVEQCLEIAPDWRQALSLKKIVEDRIAKDGVIGIGITATAVGLIVGGIATALARRN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01203 167 PIRSF TPR_repeat_11_Fis1 4 166 IPR016543 GO:0000266
Gma03g01203 167 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN B 1 166 - -
Gma03g01203 167 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 1 166 IPR016543 GO:0000266
Gma03g01203 167 SUPERFAMILY TPR-like 10 166 IPR011990 GO:0005515
Gma03g01203 167 Pfam Fis1 C-terminal tetratricopeptide repeat 90 142 IPR028061 -
Gma03g01203 167 Pfam Fis1 N-terminal tetratricopeptide repeat 51 80 IPR028058 -
Gma03g01203 167 Gene3D Tetratricopeptide repeat domain 24 166 IPR011990 GO:0005515
Gma03g01203 167 CDD Fis1 23 141 IPR033745 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01203 Gma-Chr3 37811678 37815091 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01203 K17969 - gmx:100785425 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01257 19 41591764 41595583 Gma03g01203 03 37811678 37815091 GST