Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01154 ATGACAGAGGTGTTGATGTGTATCGCCAGTGTCTCTGAGCTGAGTCCAGACGAGGAGAGGATCTTGATCAGAGACATTGCTCTCGCTTCCCAAGCTAACAGCAAAGAAGGCGACACCTTCTTCTTAATCACTCAGAGATGGTGGCAACATTGGATTGAATATGTGAACCAAGACCAGACAAATACTTCATATGATGCATCTTCCTTATCAGAACAATTTGATTTGGCCAATTCAAGTGCATTAAAGAGGCCAGCTGGTATTGATAATTCTGATTTGATAGACGATGCTGTGTTAGAGGACTCTGGTACGGGTATTGAGATTCATGATACACTTTTAGAAGGCCGTGACTATGTATTACTTCCCCAAGAAGTTTGGAACCAATTATTTAGATGGTATGGTGGTGGACCTACATTGGCAAGGAAAGTTATTAGTTCAGGTCTTTCCCAGACTGAATTGGCAGTAGAGGTTTATCCTTTACGGCTTCAATTACTTATGTTGCCAAAAAATGACCGTTTCCCTATAAGAATAAGCAAGAAGGAAACCATTGGGCAGCTTCACAGAAAAGCTTGTGAAATATTTGATCTTCAGCCAGACCAAGTGTGTATTTGGGATTACTATGCCCGTCGAAGGCATGCTTTGATGAATGACATGGACAAAACTCTCGACGATGCTAATTTACAAATGGACCAAGATATTCTTGTTGAGGTCATCAATAATACAAACAACACAAGTTTTGCTCAAGAAAATGGGTCTGCACAGAGGGAAGCAAATTCCGCTCTTGTGGAGCCTTCAAAATCAAGCTTATCAATTGCTGGTGGCTTATCTGCTAGCAGAGGTGCATCTAAAGGCTACAACACAGACCTTTCTTCATCTCAGAACTTAAATTCTCCGGTTAGAGATGTGGAAAACCCTTATGGAACTAGTGGTGTCACCACAAGAAGTTCATTCCTTGGTCTCACTGGATTGCTGAATCTTGGCAATACTTGTTACATGAATAGTGCAATACAGTGCCTTGTTCATACACCGGAATTTGCTAGGTACTTCAGGGAAGACTATCACCGAGAGATAAATTGGCAAAATCCATTGGGCATGGTTGGTGAACTAGCCCTAGCATTTGGTGAGTTGCTTCGAAAACTATGGGCACCTGGGCGAACACCAATTGCTCCTCGGCCTTTTAAAGCAAAGCTTGTTCGCTTTGCACCTCAGTTCAGTGGGCACAATCAACATGATTCTCAGGAGCTTTTAGCATTTCTTCTTGATGGTCTTCATGAAGACTTGAATCGTGTAAAGCACAAACCATATATAAAATCTCGAGATGCTGATGGCCGACCTGATGAAGAAGTGGCTGACGAATATTGGGCAAATCATATTGCTCGTAATGATTCCATAATTGTTGATGTATGCCAGGGACAATACAAGTCAACTTTGGTTTGTCCAGTTTGCAATAAAGTCTCTGTCACATTTGATCCTTTTATGTACCTTTCCCTGCCACTCCAGCCCACCACCAATAGAACCATGACAGTGACAGTTTTTGCTTGCGATGGAGCCTCCCTTCCATTTTCTTGTACAGTAACTGTCCCTAAGCAGGGACGATGCAGAGATCTCATACAGGCACTTAGCAATGCTTGCTCATTGAAGCACAATGAGAGGCTAGTACTTGTGGAGATACGAAACCATTTGATCCATAGATATTTTGAAGATCCTCTTCAATTGTTGTCTAATATCAAAGATGATGACCGTCTTGCTGCTTACAAGGTTCCAAAGATAGACAAGAACACAAAGTATCTCCAGTTGATACATCGCCAAAGAGAGCAGAGTAGTGACTCACACATCATATCTGGATGGAAACCATATGGAACACCTATTGTTTCATTGATTTCATGTGATGATACTGTCACAAGAGGTGATATACAAGTAATAGTTAATTGTATGCTCTCTCCGCTGCTAAGGAAAGGTATCAATGTAGAACAAGCTACCACTTCTGAAACAAGCATCCCAAAAGCAACATCTGATCATTGCAGTTTTAATTCTGATGATGATGCATGTGCCCCCAACATGATGTCAAATTCAGTAAATAAGGATACTACCAATTCAAAGGCACCCCCAATGCCATTGCCAACATTACCTCTTCTCTTGGTAGATGATAACAATGCTTGCATTGATCTTTCAATGGGAGAGGAGAAAGTAGTTAAACTGTCTCCATTGTCACCAAAGATTTTAGTGTATATTGATTGGTCTCAGAAGCTTCTGGAGAAGTATGATACTCATACACTTGAGACTTTGCCTGAAGTTTTAAAATATGGACCTGTAACCAAGAAAGCTCGTACTGAACCTCTCTCCTTGTACACCTGCTTGGAAGCTTTTCTGCGTGAAGAACCTCTGGTGCCCGAAGATATGTGGTACTGTCCTAAATGCAAAGAGAGACGACAAGCAAGCAAGAAGCTTGATTTGTGGAGACTCCCAGAGGTTTTGGTCATTCATTTGAAGAGGTTCTCATACAGCAGGTCAATGAAGCATAAACTGGAGACTTTTGTTAACTTTCCCATTCATGATTTTGATTTAACTAATTACATAGCCAACAAAAACAACTCTCGGCGTCAACTGTACGAACTGTATGCCCTTACAAATCATTATGGCAGTATGGGTAGCGGACATTACACTGCACATATTAAGCTTTTAGATGAGAACAGGGTGAAGACTGACGATGCCGCTGTTAGCAATGGGGCTTAG 2730 0.415 MTEVLMCIASVSELSPDEERILIRDIALASQANSKEGDTFFLITQRWWQHWIEYVNQDQTNTSYDASSLSEQFDLANSSALKRPAGIDNSDLIDDAVLEDSGTGIEIHDTLLEGRDYVLLPQEVWNQLFRWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLMLPKNDRFPIRISKKETIGQLHRKACEIFDLQPDQVCIWDYYARRRHALMNDMDKTLDDANLQMDQDILVEVINNTNNTSFAQENGSAQREANSALVEPSKSSLSIAGGLSASRGASKGYNTDLSSSQNLNSPVRDVENPYGTSGVTTRSSFLGLTGLLNLGNTCYMNSAIQCLVHTPEFARYFREDYHREINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLVRFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQPTTNRTMTVTVFACDGASLPFSCTVTVPKQGRCRDLIQALSNACSLKHNERLVLVEIRNHLIHRYFEDPLQLLSNIKDDDRLAAYKVPKIDKNTKYLQLIHRQREQSSDSHIISGWKPYGTPIVSLISCDDTVTRGDIQVIVNCMLSPLLRKGINVEQATTSETSIPKATSDHCSFNSDDDACAPNMMSNSVNKDTTNSKAPPMPLPTLPLLLVDDNNACIDLSMGEEKVVKLSPLSPKILVYIDWSQKLLEKYDTHTLETLPEVLKYGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFDLTNYIANKNNSRRQLYELYALTNHYGSMGSGHYTAHIKLLDENRVKTDDAAVSNGA 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01154 909 Pfam Ubiquitin carboxyl-terminal hydrolase 320 906 IPR001394 GO:0004843|GO:0016579
Gma03g01154 909 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 320 909 IPR028889 -
Gma03g01154 909 Gene3D - 157 243 - -
Gma03g01154 909 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 321 336 IPR018200 GO:0004843|GO:0006511
Gma03g01154 909 SUPERFAMILY Cysteine proteinases 318 905 IPR038765 -
Gma03g01154 909 MobiDBLite consensus disorder prediction 282 306 - -
Gma03g01154 909 Gene3D Cysteine proteinases 308 544 - -
Gma03g01154 909 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 869 886 IPR018200 GO:0004843|GO:0006511
Gma03g01154 909 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 12 906 - -
Gma03g01154 909 Gene3D Cysteine proteinases 741 907 - -
Gma03g01154 909 SUPERFAMILY DUSP-like 15 143 IPR035927 -
Gma03g01154 909 SMART dusp 33 146 IPR006615 GO:0004843
Gma03g01154 909 ProSiteProfiles DUSP domain profile. 14 143 IPR006615 GO:0004843
Gma03g01154 909 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12 906 - -
Gma03g01154 909 Pfam DUSP domain 37 143 IPR006615 GO:0004843
Gma03g01154 909 Gene3D - 9 156 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01154 Gma-Chr3 36942925 36953229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01154 780 907 Miscellaneous Gene Families AT4G31670 32.061 1.22e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01154 - - gmx:100785944 1792.32